Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq67 221 2e-52 seq57 125 9e-24 seq49 116 5e-21 seq23 111 2e-19 seq48 102 1e-16 seq21 91.5 2e-13 seq10 91.5 2e-13 seq22 87.8 2e-12 seq1050 86.0 8e-12 seq227 86.0 8e-12 seq165 84.2 3e-11 seq25 84.2 3e-11 >seq67 Length=8586409 Score = 221 bits (244), Expect = 2e-52 Identities = 318/445 (71%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 ||||| |||| | || || || | ||||||| ||||| ||||| || || | |||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 || || || ||||| || ||||| || || | || || ||||| ||||| | || || Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 33687 GATCCGGAAAAGAAGATTCCTTCTA-CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33745 || || ||||||||||||||||| | |||| ||||| || | || || |||||| | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 33746 GGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33802 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 33803 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33862 || || ||||||| || ||| | | |||| || |||||||| ||||| || || Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 33863 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33922 | |||||||||||||| ||||| |||| ||| |||| || || || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 33923 TCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33982 | || ||| | ||||| |||||| | || || || | || |||||||| ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 33983 TCCATCACTGGCTGCAAAAAACGCC 34007 ||||| || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 66040 CTGTTTCTTATACCATA 66056 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687 || || |||||||| || | || || || || | ||| || || || || || || ||| Sbjct 76509 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 76568 Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||||||||||||||| | |||||| | || || || || || ||||| ||||| Sbjct 76569 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 76628 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | | |||||||| || || || | ||||| || || || || ||||| | ||| | Sbjct 76629 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACGT 76688 Query 62808 TTATTAGA 62815 ||||| || Sbjct 76689 TTATTTGA 76696 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| ||||||||||| || | || || || || | | Sbjct 80776 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 80835 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 80836 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 80895 Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415 || |||| ||| || || | ||||||| || Sbjct 80896 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 |||| |||| ||| |||||||| ||||| | || || | || || || || || |||| Sbjct 95336 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 95395 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 95396 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 95455 Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171 ||| || || || || ||| | |||| || || || || ||||| Sbjct 95456 GTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCAT 95501 >seq49 Length=11612304 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| | ||| || | |||||||| | |||||||||||||| ||| Sbjct 8710636 GTTACTTTCTATGATGTGTATATTATTCTCCAAGCTTTTGTATTGACTACTGCAGTATTT 8710577 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | |||||| | |||||||||||| |||| ||||||||| ||| ||| | |||| Sbjct 8710576 CTTGGTTTGACTATGTATACTCTACAATCTAAGAAAGATTTCAGCAAATTTGGAGCAGG 8710518 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||||||||||||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct 8725947 GCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCCGCCAGCGTACACA 8725888 Query 188233 TACGAATGG 188241 | || |||| Sbjct 8725887 TCCGCATGG 8725879 >seq23 Length=20579130 Score = 111 bits (122), Expect = 2e-19 Identities = 386/593 (65%), Gaps = 21/593 (4%) Strand=Plus/Plus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||| |||| | || || || ||||| | || || || || || || || | ||| Sbjct 7834205 CATCACTTCCATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTC 7834264 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt--ttAAAT 33395 | ||| ||||| |||||||| ||||| ||| | || | | ||| || | ||| Sbjct 7834265 TAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTAC-TCGGAAACCCTTGCTAAAAC 7834323 Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455 ||| | ||| | | ||| || | |||||||| || || |||| || ||| Sbjct 7834324 CCCGCTCCAGCG-TGAGTCTGTCCGTCACGAATTCAATGTACCCCTTCACCAGAGTACAC 7834382 Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515 ||||| || |||| || ||||| | ||| | || || || || || || || || Sbjct 7834383 TTCATCCCAATGAAATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCTCACT 7834442 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575 || || || || | || || | | || ||| || | | ||||| ||| Sbjct 7834443 GCGTTGGTGATTCTCTTTC--ACCCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAAC 7834500 Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 |||| || || || || ||||||| |||||| |||| || | | || ||| || || Sbjct 7834501 ATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAA- 7834559 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 |||| || |||| ||| | | || || ||||| ||||| || || || || | || Sbjct 7834560 -TGAGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGAACAT-AA 7834617 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA 33755 |||||||||||||| ||||| ||||| || | || | |||||| | |||| ||| Sbjct 7834618 AAGAAGATTCCTTCCACTGCGGCAAACGCTACAACACGTTCTCCACAGGCGGCC---TCA 7834674 Query 33756 T-GT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 | || ||||| ||||| | |||||||| ||||||||||||| || Sbjct 7834675 TTGTGCCCCATCCATCGCCAGGCCCAGGCTGCCTTCTTGG---CACAAGGCATCGTCTCC 7834731 Query 33810 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33862 | |||||| ||||| | |||| || |||||||| ||||| || || Sbjct 7834732 ACGGCATTGAAGAGGAGCTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7834784 >seq48 Length=11824846 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 | ||| ||||| | ||| |||||||| || ||||| ||||||||||| ||||||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 || ||||||||||| ||||||||||||||||||||||| ||||| || || |||||| Sbjct 3080012 AAGTTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAAGACGTGGGAGATAAAA 3079953 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCA 34054 || || || |||||| | || || | ||| Sbjct 3079952 TACTTCTCATCTGGTTTAAGCTTGTGCCA 3079924 >seq21 Length=21652494 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||| Sbjct 1705334 TGCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTACAC 1705275 Query 188232 ATACG 188236 || || Sbjct 1705274 ATCCG 1705270 >seq10 Length=32971688 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| ||| Sbjct 17729402 TGCTCCTCCATCGAGGACGACTTAAACTATGGCAGCTGTGTGGCCTCTGCCAGCGTACAC 17729343 Query 188232 ATACGAATGG 188241 || || |||| Sbjct 17729342 ATCCGCATGG 17729333 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||| ||||| ||||||| ||||| ||||| ||||||||||| ||| Sbjct 17730620 TGCTCCTCCATCGAGGATGACTTAAACTATGGCAGCTGTGTGGCCTCTGCCAGCGTACAC 17730561 Query 188232 ATACGAATGG 188241 || || |||| Sbjct 17730560 ATCCGCATGG 17730551 >seq22 Length=20942318 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31347 TTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 31406 ||| ||||| || | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 31407 TCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 31466 ||| | ||||| | ||| | ||| ||| ||||| || | || || | ||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 31467 CCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAGGGACAGACC 31523 ||||||||||| ||||| ||||| |||||| ||| || | || | | | ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACC 6678602 Query 31524 AGACCTAGGAGCTATTCTACCATAGCA 31550 || | ||||||| ||| |||||||| Sbjct 6678601 GGAACGTGGAGCTACTCTTCCATAGCA 6678575 >seq1050 Length=12508 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| ||| Sbjct 2852 TGCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCCGCCAGCGTACAC 2911 Query 188232 ATACGAATGG 188241 | || |||| Sbjct 2912 AACCGCATGG 2921 >seq227 Length=1344493 Score = 86.0 bits (94), Expect = 8e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||| ||| Sbjct 278421 TGCTCCTCCATTGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTACAC 278362 Query 188232 AT 188233 || Sbjct 278361 AT 278360 >seq165 Length=2522703 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct 673860 GCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCATGGCCTCTGCCAGCGTACACA 673801 Query 188233 TACGAATGG 188241 | | |||| Sbjct 673800 TTCACATGG 673792 >seq25 Length=19850776 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||||||||||||||||||||||||||||| ||||| ||||| || ||||||| |||| Sbjct 6534837 GCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCCGCCAGCGCACACA 6534778 Query 188233 TACGAATGG 188241 | || |||| Sbjct 6534777 TCCGCATGG 6534769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629764152103920