Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq67 224 1e-53 seq49 172 7e-38 seq57 131 2e-25 seq48 107 3e-18 seq21 95.1 2e-14 seq10 95.1 2e-14 seq1050 89.7 7e-13 seq227 89.7 7e-13 seq22 87.8 2e-12 seq165 84.2 3e-11 seq25 84.2 3e-11 >seq67 Length=8586409 Score = 224 bits (248), Expect = 1e-53 Identities = 319/445 (72%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 ||||| |||| | || || || | ||||| | ||||| ||||| || || | |||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 ||||| || ||||| || ||||| || || | || || ||||| ||||| | ||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 36263 GATCCAGAAAAGAAAATTCCTTCTA-CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 36321 || ||||||||||| |||||||| | |||| ||||| || | || || |||||| | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 36322 GGCA-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438 ||||| | ||||| || ||| | | |||| || |||||||| || || ||||| Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 36439 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 36498 | |||||||||||||| ||||| |||| ||| |||| ||||| || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 36499 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 36558 | || ||| | ||||| |||||| | || || || | || |||||||| ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 36559 TCCGTCACTGGCTGCAAAAAACGCC 36583 || || || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq49 Length=11612304 Score = 172 bits (190), Expect = 7e-38 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 9233 CTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAGTA 9292 ||| |||| | ||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct 8707605 CTTTTTAGCTGCTTCCAAAAATCACAACAGGTGCAAGAATAGATTGATGATATCCAAGTA 8707664 Query 9293 GAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGCGT 9352 || |||||| | ||||| ||||| || ||||| || ||| |||| || ||||| || || Sbjct 8707665 GAGATTGATGGCAGCTAATACATACTCCTCAGGTGATAGCCTATGCATCAGTGAATGTGT 8707724 Query 9353 GTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCCAC 9412 ||||||||| |||||||| ||||| | |||||| || | ||||| || |||| |||| Sbjct 8707725 GTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTACAGCAGCCATAACCAATTCCAT 8707784 Query 9413 TGTTTCACTTTGCACAAATA 9432 ||| ||||| | | ||||| Sbjct 8707785 TGTCTCACTATAAAAAAATA 8707804 Score = 125 bits (138), Expect = 9e-24 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||| |||| |||||||||||||| ||||| | ||||| Sbjct 8710518 CCTGCTCCAAATTTGCTGAAATCTTTCTTAGATTGTAGAGTATACATAGTCAAACCAAGA 8710577 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||||||||||| | |||||||| | || | || |||||||||||||||||| Sbjct 8710578 AATACTGCAGTAGTCAATACAAAAGCTTGGAGAATAATATACACATCATAGAAAGTAAC 8710636 Score = 96.9 bits (106), Expect = 5e-15 Identities = 85/104 (82%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 8725879 CCATGCGGATGTGTACGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 8725938 Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCAT-GGCCATGGCGGCG 9947 ||||||||| | ||| | || |||| | ||||||| ||||| Sbjct 8725939 TGGAGGAGCGGGGGTAGCGGGGATCGGAGTCGGCCATGTCGGCG 8725982 >seq57 Length=10025392 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 66040 CTGTTTCTTATACCATA 66056 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | || | || |||| | Sbjct 80776 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 80835 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 80836 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 80895 Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 || |||| ||| || || | ||||||| || Sbjct 80896 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| |||||||||||||| | || || || || || || || || | || Sbjct 95336 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 95395 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 95396 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 95455 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| || ||||| || ||||| Sbjct 95456 GTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCAT 95501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 || || || ||||| || | || || || || ||||| || || || || || || ||| Sbjct 76509 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 76568 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 76569 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 76628 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 | | |||||||| || ||||| | ||||| || || || || ||||| | ||| | Sbjct 76629 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACGT 76688 Query 65601 TTATTAGA 65608 ||||| || Sbjct 76689 TTATTTGA 76696 >seq48 Length=11824846 Score = 107 bits (118), Expect = 3e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 | ||| ||||| | ||||||||||| || ||||||||||||||||| || |||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 >seq21 Length=21652494 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 9852 CGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGATGGAG 9911 || ||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1705270 CGGATGTGTACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGATGGAG 1705329 Query 9912 GAGCACGCGTAGAGG 9926 ||||| | |||| || Sbjct 1705330 GAGCAGGGGTAGCGG 1705344 >seq10 Length=32971688 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || |||||||| ||||| ||||||||||||| ||||||||||||| Sbjct 17729333 CCATGCGGATGTGTACGCTGGCAGAGGCCACACAGCTGCCATAGTTTAAGTCGTCCTCGA 17729392 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 |||||||||| | |||| || Sbjct 17729393 TGGAGGAGCAGGGGTAGCGG 17729412 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || |||||||| ||||| ||||||||||||| ||||| ||||||| Sbjct 17730551 CCATGCGGATGTGTACGCTGGCAGAGGCCACACAGCTGCCATAGTTTAAGTCATCCTCGA 17730610 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 |||||||||| | |||| || Sbjct 17730611 TGGAGGAGCAGGGGTAGCGG 17730630 >seq1050 Length=12508 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || |||| || ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 2921 CCATGCGGTTGTGTACGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 2862 Query 9907 TGGAGGAGCACGCGTAG 9923 |||||||||| | |||| Sbjct 2861 TGGAGGAGCAGGGGTAG 2845 >seq227 Length=1344493 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 9855 ATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGATGGAGGAG 9914 ||||| || |||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct 278360 ATGTGTACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCAATGGAGGAG 278419 Query 9915 CACGCGTAGAGG 9926 || | |||| || Sbjct 278420 CAGGGGTAGGGG 278431 >seq22 Length=20942318 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 33948 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 34007 ||| ||||| | | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 34008 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 34067 ||| | ||||| | ||| | ||| ||| ||||| || | || || | |||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 34068 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAGGGACAGACC 34124 ||||||||||| ||||| ||||| |||||| ||| ||| || | | | ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACC 6678602 Query 34125 AGACCTAGGAGCTATTCTACCATAGCA 34151 || | ||||||| ||| |||||||| Sbjct 6678601 GGAACGTGGAGCTACTCTTCCATAGCA 6678575 Score = 86.0 bits (94), Expect = 8e-12 Identities = 82/103 (80%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || ||||| || ||||| ||||||||||||||| || |||||||| Sbjct 8284690 CCATGCGGATGTGTACGCTGGCGGAGGCCACTTAGCTGCCATAGTTGACGTAGTCCTCGA 8284631 Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCAT-GGCCATGGCGGC 9946 ||||||| | || ||| | || |||| | ||||||| |||| Sbjct 8284630 TGGAGGACCGCGGGTAGTGGGGATCGGAGTGGGCCATGTCGGC 8284588 >seq165 Length=2522703 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| | ||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct 673792 CCATGTGAATGTGTACGCTGGCAGAGGCCATGCAGCTGCCATAGTTGAAGTCGTCCTCGA 673851 Query 9907 TGGAGGAGC 9915 ||||||||| Sbjct 673852 TGGAGGAGC 673860 >seq25 Length=19850776 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| | ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 6534769 CCATGCGGATGTGTGCGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 6534828 Query 9907 TGGAGGAGC 9915 ||||||||| Sbjct 6534829 TGGAGGAGC 6534837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658116945810760