Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq67 248 1e-60 seq23 138 2e-27 seq57 122 1e-22 seq48 104 3e-17 seq22 96.9 5e-15 seq54 93.3 6e-14 >seq67 Length=8586409 Score = 248 bits (274), Expect = 1e-60 Identities = 324/445 (73%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 ||||| |||| | || || || | ||||||| ||||| ||||| || || |||||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 ||||| || ||||| || ||||| || || | || || ||||| ||||| | ||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 50065 GACCCAGAAAAGAAGATTCCTTCTA-CTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT 50123 || |||||||||||||||||||| | |||||||||| || |||| || |||||| | | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 50124 GGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 50181 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 50240 || || ||||||| || ||| | | |||| || |||||||| ||||| || || Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 50241 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 50300 | |||||||||||||| ||||| |||| ||| |||| || || || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 50301 TCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTAT 50360 | || ||| | ||||| |||||| | || || || | || |||||||| ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 50361 TCCGTCACTGGCTGCAAAAAACGCC 50385 || || || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq23 Length=20579130 Score = 138 bits (152), Expect = 2e-27 Identities = 419/638 (66%), Gaps = 22/638 (3%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| |||||| | || || | |||| || ||| | || | ||| ||| |||| Sbjct 7834159 TTTAGAAGTCAGCGTCCAGGGTAAAAGAGTTCTCTGTTGGACTTGGCATCACTTCCATCC 7834218 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || || || ||||| | || || || || || || || | ||| | ||| ||||| | Sbjct 7834219 TCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTCTAGTGAAATATTCT 7834278 Query 49730 CCATGAAATCAAACGGA-TTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||||| ||||| ||| || || | | || | ||| ||| | ||| | Sbjct 7834279 CCATGAAGTCAAATGGACTTTCTACTCGGAAACCCTTGCTAAAACCCCGCTCCAGCG-TG 7834337 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | ||| |||| || ||||| || || |||| || ||| ||||| || || | Sbjct 7834338 AGTCTGTCCGTCACGAATTCAATGTACCCCTTCACCAGAGTACACTTCATCCCAATGAAA 7834397 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 || ||||| | ||| | || || || || || || || || || | || || | Sbjct 7834398 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCTCACTGCGTTGGTGATTCTC 7834457 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 || || | | || ||| |||| | ||||| ||||||| || || || Sbjct 7834458 TTTC--ACCCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAACATCAGGCAGGCAAAG 7834515 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || ||||||| |||||| |||| || | |||| |||||| || |||| || |||| Sbjct 7834516 TCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAA--TGAGGCCAGGCACC 7834573 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 ||| | | || || ||||| ||||| |||||||| || | | |||||||||||||||| Sbjct 7834574 AGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGAAC-ATAAAAGAAGATTCCTTCC 7834632 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA-TGT-----ATCCAC 50142 ||||||||||| || |||| | ||||| || |||| ||| ||| ||||| Sbjct 7834633 ACTGCGGCAAACGCTACAACACGTTCTCC---ACAGGCGGCCTCATTGTGCCCCATCCAT 7834689 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 ||||| | |||||| || ||||||||||||| || | |||||| ||||| Sbjct 7834690 CGCCAGGCCCAGGCTGCCTTC---TTGGCACAAGGCATCGTCTCCACGGCATTGAAGAGG 7834746 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGAT 50240 | |||| || |||||||| ||||| || || Sbjct 7834747 AGCTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7834784 >seq57 Length=10025392 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || ||||||||||||| ||| |||||||| || || || ||||| || || | | |||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 66040 CTGTTTCTTATACCATA 66056 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358 ||| |||||||| || || | || | ||| | ||||| || || || || ||||| || Sbjct 76508 GTAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATA 76567 Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418 |||||||||||| || || | |||||| | || || ||| | || ||||| ||||| Sbjct 76568 ATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATA 76627 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 | | |||||||| || ||||| | ||||| || || || || ||||| | ||| | Sbjct 76628 CCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACG 76687 Query 79479 CTTATTAGA 79487 ||||| || Sbjct 76688 TTTATTTGA 76696 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| ||||||||||| || | || || || |||| | || Sbjct 80780 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 80839 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 80840 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 80899 Query 80059 TCCAAGTATATGGCCATAACTCCCGGTCG 80087 |||| ||| || || | |||| ||||| Sbjct 80900 TCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 >seq48 Length=11824846 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| |||||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 | ||| ||||| | |||||||| || || ||||| ||||||||||| || |||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 3086635 Query 50104 AC 50105 || Sbjct 3086634 AC 3086633 >seq22 Length=20942318 Score = 96.9 bits (106), Expect = 5e-15 Identities = 147/208 (71%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 47751 TTGTACTTCCTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 47810 ||| |||||||| | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 47811 TCCCGTATTTACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 47870 |||| | ||||| | || | ||| ||| ||||| || | || || | ||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 47871 CCTATAATCTTCGTCTATTACACCACCTCCTATATCAATGCCTTTTAGTGACAGTCCA-- 47928 ||||||||||| ||||| |||||| |||||| ||| || | | || ||| ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTG-CAGCCCAAC 6678603 Query 47929 --GACCTAGGAGCTATTCTACCATAGCA 47954 || | ||||||| ||| |||||||| Sbjct 6678602 CGGAACGTGGAGCTACTCTTCCATAGCA 6678575 >seq54 Length=10138281 Score = 93.3 bits (102), Expect = 6e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 47703 TCCAGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCC 47760 |||||| || ||||| ||| ||||| ||| | ||| ||| | | ||| | |||| Sbjct 890008 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTCAGTGTC--ATCCAAAACTTGAATTTCC 890065 Query 47761 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 47820 || | |||||||||| | || |||| | | || ||||| || ||| || ||| | ||| Sbjct 890066 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTTGGTCACCCTTTTTT 890125 Query 47821 ACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 47880 || | || | ||| ||| ||||| || | || || | ||||| ||||||||| Sbjct 890126 ACTTCAAATTTTTTTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATCT 890185 Query 47881 TCGTCTATTACACCACCTCCTATATCAAT 47909 || ||||| |||||| |||||| ||| || Sbjct 890186 TCATCTATAACACCAGCTCCTACATCTAT 890214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718207845913960