Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq67 172 5e-38 seq48 111 2e-19 >seq67 Length=8586409 Score = 172 bits (190), Expect = 5e-38 Identities = 308/446 (69%), Gaps = 3/446 (1%) Strand=Plus/Plus Query 13857 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13916 ||||| || | || || ||||| | ||| || | |||| |||||| || ||||||||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 13917 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAAT 13976 || || ||||| | || ||||||| ||||| ||| || | ||| ||||| ||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 13977 GACCCGGAAAAGAATATTCCCT-CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGA 14035 || || |||||||| ||||| | ||||||| ||||| || | | | ||||||| | | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 14036 TGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 14095 | | || || | ||||| | ||||| || | || | || | || ||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 14096 TGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14155 || ||| | ||||| || | | | ||| | || || | | | |||||| || ||||| Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 14156 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 || | |||||||||||||| ||||||| |||||| | || || || | || || || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 14216 TCTAGCTTCCGACCAT-TGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTA 14274 | |||| ||| || || ||||| | || | || |||| |||||||| |||| Sbjct 7039415 GCGGGCTT-CGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTA 7039473 Query 14275 TACCATCACTAGCTGCAAAAAATGCC 14300 | ||||| || |||||||| || ||| Sbjct 7039474 TGCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq48 Length=11824846 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 |||||||| || || ||||| || ||||| || | ||| ||||||| |||| ||| ||| Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14014 ||||| ||||| ||||||||||| || || ||||| ||||| || || |||||||| || Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479687289082600