Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq67 224 1e-53 seq57 132 6e-26 seq23 127 3e-24 seq48 111 2e-19 seq54 89.7 7e-13 seq22 87.8 2e-12 >seq67 Length=8586409 Score = 224 bits (248), Expect = 1e-53 Identities = 319/445 (72%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 ||||| |||| | || || || | ||||||| ||||| |||||| || || | |||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 ||||| || ||||| || ||||| || || | || || ||||| ||||| | ||||| Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 42170 GATCCAGAAAAGAAGATTCCTTCTA-CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 42228 || |||||||||||||||||||| | |||| ||||| || | || || |||||| | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 42229 GGCA-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 || || ||||||| || ||| | | |||| || |||||||| || || || || Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 42346 CAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 42405 | |||||||||||||| ||||| |||| ||| |||| || || || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 42406 TCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTAT 42465 | ||| ||| | | ||| |||||| | || || || | || ||||| || ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 42466 TCCGTCACTGGCTGCAAAAAACGCC 42490 || || || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 132 bits (146), Expect = 6e-26 Identities = 111/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| |||||||||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | || | Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 66040 CTGTTTCTTATACCAT 66055 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 |||| |||| ||| |||||||| ||||| | || || || || || || || || |||| Sbjct 95336 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 95395 Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 95396 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 95455 Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 ||| || || || || ||| | |||| || ||||| || ||||| Sbjct 95456 GTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCAT 95501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || ||||| || | | | ||| || ||||| || || || || ||||||||| Sbjct 76509 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 76568 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||||||||| || || | |||||| | || || || || || ||||| ||||| Sbjct 76569 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 76628 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | | |||||||| || ||||| | ||||| || || || || ||||| | || | Sbjct 76629 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACGT 76688 Query 71563 TTATTAGA 71570 ||||| || Sbjct 76689 TTATTTGA 76696 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| ||||||||||| || | || || || |||| | || Sbjct 80780 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 80839 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 80840 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 80899 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 80900 TCCAGGTAAATAGC 80913 >seq23 Length=20579130 Score = 127 bits (140), Expect = 3e-24 Identities = 364/552 (66%), Gaps = 17/552 (3%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||| |||| | || || || ||||| | || || || || || ||||| | ||| Sbjct 7834205 CATCACTTCCATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTC 7834264 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGA-TTGGTAACATTATAAAtttttttAAATC 41879 | ||| ||||| |||||||| ||||| ||| || || | | || | ||| | Sbjct 7834265 TAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTCGGAAACCCTTGCTAAAACC 7834324 Query 41880 CCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || | ||| | | ||| || | | |||||| || || |||| || ||| | Sbjct 7834325 CCGCTCCAGCG-TGAGTCTGTCCGTCACGAATTCAATGTACCCCTTCACCAGAGTACACT 7834383 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || || | || ||||| | ||| | || || || || || || || || | Sbjct 7834384 TCATCCCAATGAAATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCTCACTG 7834443 Query 42000 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTC--GGTGGATACAATAAATGTTTAAA 42057 ||| || || | ||| | ||| | || ||| | || | ||||| || Sbjct 7834444 CGTTGGTGATTCT----CTTTCACCCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAA 7834499 Query 42058 CATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAA 42117 ||||| || || || || ||||||| ||||||| |||| || | | || |||||| || Sbjct 7834500 CATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAA 7834559 Query 42118 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGA 42177 |||| || |||| ||| | | || || ||||| ||||| |||||||| || | | | Sbjct 7834560 --TGAGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGAAC-ATA 7834616 Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACT 42234 ||||||||||||||| ||||| ||||| || | || | |||||| | ||| || | Sbjct 7834617 AAAGAAGATTCCTTCCACTGCGGCAAACGCTACAACACGTTCTCCACAGGCGGCCTCATT 7834676 Query 42235 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 || ||||| ||||| | |||||| || ||||||||||||| || | Sbjct 7834677 GTGCCCCATCCATCGCCAGGCCCAGGCTGCCTTC---TTGGCACAAGGCATCGTCTCCAC 7834733 Query 42295 GGCATTAAAGAG 42306 |||||| ||||| Sbjct 7834734 GGCATTGAAGAG 7834745 >seq48 Length=11824846 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | ||| |||||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 | ||| ||||||| ||||||||||| || ||||| ||||||||||| || |||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 >seq54 Length=10138281 Score = 89.7 bits (98), Expect = 7e-13 Identities = 149/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 39798 TCCAGTTGATCCAAATCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 39855 |||||| || ||||| ||| ||||| ||| | ||| ||| | | ||| | ||| Sbjct 890008 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTCAGTGTC--ATCCAAAACTTGAATTTCC 890065 Query 39856 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 39915 || | |||||||||| | || |||| | | || ||||| || ||| || ||| | ||| Sbjct 890066 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTTGGTCACCCTTTTTT 890125 Query 39916 ACATTGAAAGTACATTTT-CCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATC 39974 || || ||| | |||| ||| ||||| || | || || | ||||| |||||||| Sbjct 890126 AC-TTCAAATTTTTTTTTGCCAAAATTAAACAGTACAACACCAAGATTTCCTCTATAATC 890184 Query 39975 TTCGTCTATTACACCGCCTCCTATATCAATA 40005 ||| ||||| ||||| |||||| ||| ||| Sbjct 890185 TTCATCTATAACACCAGCTCCTACATCTATA 890215 >seq22 Length=20942318 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 39846 TTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 39905 ||| ||||| || | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 39906 TCCCGTATTTACATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 39965 |||| | ||||| | || | ||| ||| ||||| || | || || | ||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 39966 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAGGGACAGACC 40022 ||||||||||| ||||| ||||| |||||| ||| ||| || | | | ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACC 6678602 Query 40023 AGACCTAGGAGCTATTCTACCATAGCA 40049 || | ||||||| ||| |||||||| Sbjct 6678601 GGAACGTGGAGCTACTCTTCCATAGCA 6678575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671082245449640