Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq127 82.4 6e-11 >seq127 Length=3912380 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/231 (69%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | | ||| || || | |||||| ||||| || ||||| |||||||| || Sbjct 1383995 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1384054 Query 15197 AGAAT-TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 ||| | | || |||||| | ||| ||| ||| | |||| | ||| || || || Sbjct 1384055 AGAGTATGTCT-GTCTTCCAGTTGCTTGACAGAA-AGATCAGTCTTTGCTGATCAGGAGG 1384112 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||||||| || || | || ||| ||||||| ||| ||| ||||| | | || Sbjct 1384113 AATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAAC 1384172 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 | | || ||||| || || || || ||||| |||||||| ||||| || Sbjct 1384173 CTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362149232953449