Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq100 114 1e-20 >seq100 Length=4670911 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 546218 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAAGAGGTGATGCCCCAGGCC 546277 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || | || || || ||||| || || | ||| || || ||||| || ||||||||||| Sbjct 546278 GAGAGCCAGGGCCCGGACATCAAGGAGCCCGTGAACTCGCTGGGGGAGAAGCTGAAGACG 546337 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 |||| || | ||||| ||||| Sbjct 546338 CTGAGGCTGCAGCTGCGGCGCTG 546360 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| ||||| | ||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 548466 AGCTCCAGGAGAAAGGGGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 548525 Query 127439 TCGAGACTTACATG 127452 ||||| | |||||| Sbjct 548526 TCGAGGCCTACATG 548539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430018816895768