Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 100 2e-16 >seq5 Length=37766398 Score = 100 bits (110), Expect = 2e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || ||||| | || || |||||||| ||||| || ||||||||||||||| ||||| Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | |||||||| | | |||| |||||| ||||| || || ||||| ||| Sbjct 25977126 ACACCTAGCCCCATGT-CTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 25977184 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 |||||| ||||| || | || | ||| ||||| || || || Sbjct 25977185 CACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 25977226 Score = 82.4 bits (90), Expect = 5e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || |||| ||||||||| || || || || || |||| ||| Sbjct 25979479 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTC 25979538 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 ||| |||| ||| || ||| | |||| ||||| | ||| || |||||||| Sbjct 25979539 TCCTTCTTTTCTGCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 25979598 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||| || || ||||| || || ||||| | || ||||| || Sbjct 25979599 CCAGATTTTCACTCCCTTAGACGACAGTTCTTTAGCATTCGTGGATCC 25979646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340109456696097