Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq34 150 3e-31 seq75 122 1e-22 >seq34 Length=16311045 Score = 150 bits (166), Expect = 3e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| |||||||| |||||||||||| || | || || ||||| ||||| Sbjct 10488098 GTCTGGAACAACCGTTCGTCATCCCATTCTGGATGCTCCTGCTTAAGCACATCACACACC 10488157 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||| ||||| | ||||| || || || |||||||| |||||||||||||| ||||| Sbjct 10488158 CTGTTATGTTCGCGCAGCCAAATCGTGGCATACATCATCAGACCAGGCACCAGACCAAAT 10488217 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 |||| || || || || || |||| | ||| || || | || || |||||||| | Sbjct 10488218 ACCTCCTGGCCCACCGCAAGCCGCAGGTGTTCAGGGACATGAGGCGGGTAGATCATCTCG 10488277 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAA 9856 ||||| ||||||||| | ||| ||||| | || || |||| Sbjct 10488278 GCCTGGGTATCTTTGACTGTGGGAGGATAGACCTCTCCATCAA 10488320 Score = 120 bits (132), Expect = 4e-22 Identities = 197/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8693 GGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCA 8752 || || ||||| ||||| | |||| |||||||| || | ||| | |||| ||| | Sbjct 10486540 GGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGGAGGCAGTATTGATGATTTTA 10486599 Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || ||||| || ||||| || ||||| ||||||||||| || || || || || Sbjct 10486600 AAACCCACTTCACCGCCAAAAGTGCTAGGTTTCCAGTAGTGAGGAGAACATATAGGATTG 10486659 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 |||| || || || | |||||| || || || || || | ||| ||||||| |||||| Sbjct 10486660 CCCATCAGTCCCTTCAAGGAAAAGGGGGCTCCGAGTTCTACCATGGTCTCACCAAAGATG 10486719 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 | || || |||| ||| |||| | | | |||| ||||| || || ||||| Sbjct 10486720 CTATCTGGGCGAGGCTCTTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 10486779 Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976 || || || | | |||||||| |||||||| |||||||| Sbjct 10486780 CCATAGAGCTCTTCTAACTCGGCAGCCATTTCCTTCTCTCCTGT 10486823 Score = 116 bits (128), Expect = 5e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| |||||||||||||| || || || |||||| ||| ||| | || Sbjct 10489202 TCTTACCCCATGACCCAGTCCTTTAGTAAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 10489261 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 |||||| || ||||| || ||| |||| || || ||||| || || |||||||||||||| Sbjct 10489262 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCGAACATCAAATTTGTGCCCTGGGGATC 10489321 Query 10148 GGGAGTGAA 10156 ||| |||| Sbjct 10489322 AGGAATGAA 10489330 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | |||||||| || || | || || ||||| ||| || | | Sbjct 10489814 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGACACAGGAGGAAGAGCTCTGGTG 10489873 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 |||||||||||||| || || |||||||||||| || | |||| || || || | Sbjct 10489874 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCATAGTGTGCATTATAAGTT 10489933 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || |||||||||||||||| ||||| ||||| Sbjct 10489934 GGTGGGCTGTCAATCAAATGTGATCTGGCTGAA 10489966 Score = 86.0 bits (94), Expect = 9e-12 Identities = 179/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | |||||| |||| || |||| ||||| || | ||||||||||| || | Sbjct 10487491 CTTACCCTGCCAGCATTTTGCTTGCTGAATGATTCAACAAATTGGGTAATGCCATGTTCC 10487550 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATG-TAGTCATACTTTGTTTTATCAATCTC 9440 || | || ||||||||||| | ||| | || ||| |||| | |||||| | Sbjct 10487551 ATTAATAAAGAATTGTTGTAGA-GAAACTGTTGATAGCTGTACTCCTGGTCATCAATTTG 10487609 Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500 ||| | || |||| || | |||||||| || | |||||||||| | | || || Sbjct 10487610 AAAGGTGTCAGGCAGAAGGGGGTGCCAGTGGTAGAGGGTGTTAAACTCAGCAGCGATGCG 10487669 Query 9501 ATTTTGGTACTGGAACGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGTG 9560 |||||||||||||| |||||||| || || | |||| || | ||||| Sbjct 10487670 GTTTTGGTACTGGAATTGTTGGTTGAAGAGCAGCTCTGGGTCAAACTTCAGTTTGAAGTG 10487729 Query 9561 GTAGCCGCTGAGCTGCTGAACATA 9584 ||||| || | ||||| ||||| Sbjct 10487730 ATAGCCACTCAAGTGCTGTACATA 10487753 >seq75 Length=6310612 Score = 122 bits (134), Expect = 1e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || |||| || || || || ||||| | |||||||| | || || |||||| | ||| Sbjct 6036654 AAGCCCATTTCACCACCAAACGTGCTTGACTTCCAGTACTCGGGAGAACAGATGGCATTC 6036595 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 | | |||||| ||||||||||| |||||||| | || | || ||||| || |||||| Sbjct 6036594 CCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATACTCTCCCCAAAGATG 6036535 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 | ||| ||| || ||| || | | | ||| | ||| ||||||| || || |||||| Sbjct 6036534 GAGTTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCAAGGCATCAATGTCT 6036475 Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || || || || | ||| || || || |||||||||||| Sbjct 6036474 CCATATAGCTCCTCCAATTCAGCTGCCATCTCCTTTTCTCCT 6036433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708464672814160