Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq126 100 3e-16 seq19 96.9 3e-15 seq228 89.7 5e-13 >seq126 Length=3816233 Score = 100 bits (110), Expect = 3e-16 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 94775 TACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAA 94834 || || |||||||| || |||| |||| ||||| ||| || || || || | ||| || Sbjct 216269 TAGACACCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAG 216210 Query 94835 TCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 ||| || | | ||| ||||| ||||| ||| ||||||| | || | ||| || Sbjct 216209 TCGGACAGGGAGCCC--ATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCA 216152 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 || || || ||||||||||| | ||| || ||||||| || |||||| | | Sbjct 216151 GGGGGGATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGC 216092 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCT 95003 || || | | |||||||| || | ||| | ||| ||||||||||||| Sbjct 216091 TCAACCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 >seq19 Length=23049436 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || |||||||| | | | || || || ||||| ||| ||||| || || | Sbjct 10825118 AGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTGTGTCCATCTTCCAGTTGCTTGAC 10825177 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 ||||||||| |||||||||||| |||||||| ||||| || || | || || ||||| Sbjct 10825178 AGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 10825237 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || | | || || | | | || || || | |||||||| || || || ||||| Sbjct 10825238 TACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTGAGAGT 10825297 Query 94990 TTTCACAAAGATCTGCAT 95007 ||||| || |||||||| Sbjct 10825298 TTTCAAGAAAATCTGCAT 10825315 >seq228 Length=1351672 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||||| || ||||| || || | ||| || | || | || || || |||| Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGT--CTGAGAGAGTGCGACCATCC 29230 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||| | | |||| || | | ||||| || | | || || || ||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCT 29290 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||||| || ||||| | | |||||| | | || || |||| ||||| || Sbjct 29291 TGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTC 29350 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||||||||||||||| Sbjct 29351 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448253156888040