Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq125 154 2e-33 seq41 127 3e-25 seq351 116 6e-22 >seq125 Length=3709634 Score = 154 bits (170), Expect = 2e-33 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | || |||||||||||||| || ||||||||||| || || Sbjct 2628228 CGCCAAGCGGCACCGCAAAGTCCTGCGAGATAACATCCAGGGCATCACCAAGCCCGCCAT 2628287 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||||||||| ||||| || |||||||| |||| || | | || ||||| | Sbjct 2628288 CAGGCGTCTGGCTCGGCGTGGGGGTGTCAAGCGGATCTCGGGTCTCATTTACGAAGAAAC 2628347 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| ||||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 2628348 TCGGGGTGTGCTGAAGGTGTTCCTGGAGAACGTCATCCGGGACGCCGTCACCTACACGGA 2628407 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | || || || |||| || || || Sbjct 2628408 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCCCTGAAGCGGCAGGG 2628467 Query 16672 CCG 16674 ||| Sbjct 2628468 CCG 2628470 >seq41 Length=12856485 Score = 127 bits (140), Expect = 3e-25 Identities = 174/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 99865 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 99806 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | | || || |||| Sbjct 99805 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATTTACGAGGAGAC 99746 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| ||||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 99745 TCGGGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 99686 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | || || || | || || || || Sbjct 99685 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 99626 Query 16672 CCG 16674 ||| Sbjct 99625 CCG 99623 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 169178 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 169119 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 169118 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 169059 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 169058 GCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 168999 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | || || || | || || || || Sbjct 168998 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 168939 Query 16672 CCG 16674 ||| Sbjct 168938 CCG 168936 Score = 118 bits (130), Expect = 2e-22 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 121736 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 121795 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 121796 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 121855 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 121856 GCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 121915 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | || || || | || || || || Sbjct 121916 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 121975 Query 16672 CCG 16674 ||| Sbjct 121976 CCG 121978 Score = 82.4 bits (90), Expect = 1e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 60875 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 60934 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 60935 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 60994 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCC 16589 || | || | ||| | ||||| ||| ||| |||| Sbjct 60995 GCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCC 61032 Score = 82.4 bits (90), Expect = 1e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 81910 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 81969 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 81970 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 82029 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCC 16589 || | || | ||| | ||||| ||| ||| |||| Sbjct 82030 GCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCC 82067 >seq351 Length=425020 Score = 116 bits (128), Expect = 6e-22 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| || || || |||||||| || ||||||||||| || ||| Sbjct 230673 GCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCATC 230614 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 230613 CGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGACG 230554 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | ||||| ||| ||| |||| || || || ||| || ||| Sbjct 230553 CGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGAG 230494 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| ||||||| | || || || | || || || ||| Sbjct 230493 CACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGGC 230434 Query 16673 CG 16674 || Sbjct 230433 CG 230432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068992769777