Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq67 239 6e-58 seq57 131 2e-25 seq23 120 4e-22 seq48 111 2e-19 seq22 87.8 2e-12 >seq67 Length=8586409 Score = 239 bits (264), Expect = 6e-58 Identities = 322/445 (72%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 ||||| |||| | || || || | ||||||| ||||| ||||| || || |||||| Sbjct 7039055 TGTTTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCG 7039114 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 ||||| || ||||| || ||||| || || | || || ||||| ||||| | || || Sbjct 7039115 TTGGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAA 7039174 Query 33409 GATCCAGAAAAGAAGATTCCTTCTA-CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33467 || |||||||||||||||||||| | |||| ||||| || | || || |||||| | Sbjct 7039175 GAACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGT 7039234 Query 33468 GGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 | | || ||| | ||||| | ||||| || |||||| | || |||||||||| Sbjct 7039235 GACCTCTTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCAT 7039294 Query 33525 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33584 || || ||||||| || ||| | | |||| || |||||||| ||||| || || Sbjct 7039295 GGTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7039354 Query 33585 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 33644 | |||||||||||||| ||||| |||| ||| |||| || || || | |||||| || Sbjct 7039355 GAGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCA 7039414 Query 33645 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTAT 33704 | || ||| | ||||| |||||| | || || ||| |||| |||||||| ||||| Sbjct 7039415 GCGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTAT 7039474 Query 33705 TCCGTCACTGGCTGCAAAAAACGCC 33729 || || || |||||||| || ||| Sbjct 7039475 GCCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq57 Length=10025392 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 66039 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 66040 CTGTTTCTTATACCATA 66056 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 80776 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 80835 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 80836 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 80895 Query 63332 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 || |||| ||| || || | ||||||| || Sbjct 80896 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 80928 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| |||| ||| |||||||| ||||| | || || || || || || || || |||| Sbjct 95336 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 95395 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 95396 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 95455 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||| || || || || ||| | |||| || || || || ||||| Sbjct 95456 GTTCCACAGTAGTGACCCCACTGTATAAACCCTGGATTACTTTCAT 95501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 || || || ||||| || | || || || || ||||| || || || || || || ||| Sbjct 76509 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 76568 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 76569 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 76628 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | | |||||||| || || || | ||||| || || || || ||||| | ||| | Sbjct 76629 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATAGGGCGATGACGT 76688 Query 62757 TTATTAGA 62764 ||||| || Sbjct 76689 TTATTTGA 76696 >seq23 Length=20579130 Score = 120 bits (132), Expect = 4e-22 Identities = 387/592 (65%), Gaps = 19/592 (3%) Strand=Plus/Plus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| ||| |||| | || || || ||||| | || || || || || || || | ||| Sbjct 7834205 CATCACTTCCATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTC 7834264 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGA-TTGGTAACATTATAAAtttttttAAATC 33118 | ||| ||||| |||||||| ||||| ||| || || | | || | ||| | Sbjct 7834265 TAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTCGGAAACCCTTGCTAAAACC 7834324 Query 33119 CCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 || | ||| | | ||| |||| |||||||| || || |||| || ||| | Sbjct 7834325 CCGCTCCAGCG-TGAGTCTGTCCGTCACGAATTCAATGTACCCCTTCACCAGAGTACACT 7834383 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || || | || ||||| | ||| | || || || || || || || || | Sbjct 7834384 TCATCCCAATGAAATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCTCACTG 7834443 Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298 | | || || | || || | | || ||| |||| | ||||| |||| Sbjct 7834444 CGTTGGTGATTCTCTTTC--ACCCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGAACA 7834501 Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358 ||| || || || || ||||||| |||||| |||| || | |||| |||||| || Sbjct 7834502 TCAGGCAGGCAAAGTCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAA-- 7834559 Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418 |||| || |||| ||| | | || || ||||| ||||| || || || || | | ||| Sbjct 7834560 TGAGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGAAC-ATAAA 7834618 Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT 33478 ||||||||||||| ||||| ||||| || | || | |||||| | |||| |||| Sbjct 7834619 AGAAGATTCCTTCCACTGCGGCAAACGCTACAACACGTTCTCCACAGGCGGCC---TCAT 7834675 Query 33479 -GT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532 || ||||| ||||| | |||||||| ||||||||||||| || | Sbjct 7834676 TGTGCCCCATCCATCGCCAGGCCCAGGCTGCCTTCTTGG---CACAAGGCATCGTCTCCA 7834732 Query 33533 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 33584 |||||| ||||| | |||| || |||||||| ||||| || || Sbjct 7834733 CGGCATTGAAGAGGAGCTCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAAT 7834784 >seq48 Length=11824846 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| |||||||| ||||| || || | || || Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 | ||| ||||| | ||| |||||||| || ||||| ||||||||||| ||||||||||| Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3086636 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 |||| ||||||||||| ||||| ||||||||||||||||| ||||| || || |||| Sbjct 3080014 CCAAGTTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAAGACGTGGGAGATAA 3079955 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 |||| || || |||||| | || || | ||| Sbjct 3079954 AATACTTCTCATCTGGTTTAAGCTTGTGCCA 3079924 >seq22 Length=20942318 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31095 TTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 31154 ||| ||||| || | |||||||||| | || ||| ||| || ||| | || |||| || Sbjct 6678781 TTGAACTTCCTCTATTTCTGGATAAAAAATCTGTTCATAAATGAGCAGTGCAATTCGGTC 6678722 Query 31155 TCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 31214 ||| | ||||| | ||| | ||| ||| ||||| || | || || | ||||| Sbjct 6678721 TCCCTTTTTTACTTCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAAGATTTCC 6678662 Query 31215 CCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAGGGACAGACC 31271 ||||||||||| ||||| ||||| |||||| ||| || | || | | | ||| Sbjct 6678661 TCTATAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTCTGCAGCCCAACC 6678602 Query 31272 AGACCTAGGAGCTATTCTACCATAGCA 31298 || | ||||||| ||| |||||||| Sbjct 6678601 GGAACGTGGAGCTACTCTTCCATAGCA 6678575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622894335143240