Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq57 86.0 2e-11 >seq57 Length=10025392 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || |||||||| || || |||||| ||| || || |||||||||||||| | Sbjct 80922 GGAGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGACATCTTTGAGTTTCTTGATTTA 80863 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| || Sbjct 80862 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 80803 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || ||||| || |||||| Sbjct 80802 CCGGATCTCTTCATGAAACGAGTGGAG 80776 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364118 AGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACA 364177 |||| |||| ||| || || || || |||| |||||||| || || || ||| | |||| Sbjct 79596 AGCTTTGGTATGCGATTATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACA 79537 Query 364178 AAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACC 364237 ||||||| || || || ||| ||| || ||| |||| || ||||| | ||||||| Sbjct 79536 AAGATTCCTGTAATCGGAAGAGCAATCAACAGAACCTGGGAACAATCAAATGCAGCAACC 79477 Query 364238 TATGTACCGAGATTATTGAATACACC 364263 | || || || || | ||||| ||| Sbjct 79476 TGTGCACAGAAATAGTAGAATATACC 79451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303240229008998