Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 seq186 82.4 6e-11 seq14 82.4 6e-11 >seq7 Length=35612534 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||||||||| || ||||||||||||||| || | | | ||||| ||||| ||| Sbjct 30012222 GATAAAGAAGGAACTCCTCCTGATCAGCAAAGACTGATCTTTACTGGCAAGCAATTGGAA 30012163 Query 115439 GAT-GACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 || |||| | | || | || || ||||||||||| ||||| ||| | ||| | ||||| Sbjct 30012162 AATAGACATA-CTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 30012104 Query 115498 GAGATTGCGAGGAGG 115512 |||| | || || || Sbjct 30012103 GAGACTTCGTGGTGG 30012089 >seq186 Length=2028101 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| || || || || || || || || ||||| ||| | || | |||| || Sbjct 786051 AAAATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGATGGAGCCC 786110 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || || ||| | || ||| || || ||||| |||||| |||| ||| Sbjct 786111 AGTGATACCATTGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGAC 786170 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || || | ||| ||||| || | ||||||| | || | | || || Sbjct 786171 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCTGACTAC 786230 Query 115463 AACATTCAAAAAGAGTCTAC 115482 ||||| || |||||||| || Sbjct 786231 AACATCCAGAAAGAGTCCAC 786250 >seq14 Length=29593583 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| | || ||||||||||||||| || | ||| ||||| ||| | ||| Sbjct 11200356 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 11200297 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| | || || | || || ||||||||||| ||||| ||| | ||| | |||||| Sbjct 11200296 AATGGGCATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTG 11200237 Query 115499 AGA 115501 ||| Sbjct 11200236 AGA 11200234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425308806638680