Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq186 95.1 1e-14 seq228 86.0 5e-12 >seq186 Length=2028101 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| |||||||| || || ||||||||||| | | || | | || Sbjct 786265 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCT 786206 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||| ||| ||||| ||| | ||| || || || Sbjct 786205 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 786146 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | || || | ||||||| | |||| |||||||| Sbjct 786145 TGGATCTTGGCT--TTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGG 786088 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| || || || || || ||||||||| Sbjct 786087 TCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATTTTG 786050 >seq228 Length=1351672 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/217 (70%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||| || || || ||||||||||| | | || | ||| Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC-CACAGGCACGCCCTCTTTGTC 16842 || | ||||||| ||| |||| || ||||| ||||| ||||| | |||||| ||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGG-ATGCCCTCCTTGTC 29289 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || ||| || || | | | ||||| | |||||| || | |||||| Sbjct 29290 TTGGATTTTAGCT--TTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATA 29347 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTT 16937 || || || ||||| || || ||||| |||||||||| Sbjct 29348 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405054482639110