Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq125 104 2e-17 seq19 87.8 1e-12 seq127 86.0 4e-12 seq57 86.0 4e-12 seq42 86.0 4e-12 seq126 82.4 5e-11 >seq125 Length=3709634 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| || ||||| || |||| || |||||||| Sbjct 1584999 AAGCCCGTTCCCTTGGCTGTGGTTTCACTGGATAGGAGGAAGGGACAGCGGGAATCTCGT 1585058 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||| ||||||||||||||| |||||||| Sbjct 1585059 TCATCCATTCGTGCGCGTCACTAATTGGATGACGA 1585093 >seq19 Length=23049436 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGA---GTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 |||||| | ||||||| ||| |||||||||||| |||| ||||||||| || | Sbjct 10825100 CAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTGTGTCC 10825159 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | ||| || | ||||| ||||| | ||| ||||| | || | ||||| || Sbjct 10825160 ATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 10825219 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || || ||| ||||| | | ||||| |||||| || | || || Sbjct 10825220 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 10825279 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || ||||| | ||||||| ||| |||||||| || Sbjct 10825280 GGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq127 Length=3912380 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | |||||| | |||||||||| |||||||||||| ||||| |||| Sbjct 1383993 TACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAG 1384052 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | | || ||| || | ||| || | | ||| || || | ||| ||||| | | Sbjct 1384053 ACAGAGTATGTCTGTCTTCCAGTTGCTTGACAG-AAAGATCAGTCTTTGCTGATCAGGAG 1384111 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || ||| || || ||| ||||| | | ||||| | ||| Sbjct 1384112 GAATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAA 1384171 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | | | || || || || ||||| | ||||||||| || |||||||| || Sbjct 1384172 CCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223 >seq57 Length=10025392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| || ||||||||||||||||||| |||||||| |||| || | ||| || Sbjct 1957051 AAGCCTGTCCCCTTGGCTGTGGTTTCGCCGGATAGTAGGCAGGGACAGTGGGACTCTGGT 1957110 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||| || ||||||||||||||||| || Sbjct 1957111 TCATCCATTCACGCACGTCACTAATTAGATGAGGA 1957145 >seq42 Length=12891055 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 || || |||| ||||||| |||||| ||| |||||||| ||||| || ||||| || Sbjct 12117642 AACCCTGTTCTCTTGGCTTTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 12117583 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| |||||||||||||||| || Sbjct 12117582 TCATCCATTCATGCATGTCACTAATTAGATGATGA 12117548 >seq126 Length=3816233 Score = 82.4 bits (90), Expect = 5e-11 Identities = 153/224 (68%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| ||||| || |||| |||| || |||||| ||| || ||||| ||||| || || Sbjct 216264 ACCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGGA 216205 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | | || || | |||||| |||||||| || || | | || || | ||| Sbjct 216204 CAGGGAGCC--CATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGG 216147 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || |||||||||||| ||| || ||| ||||||| || || || | ||||| Sbjct 216146 GATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAAC 216087 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCT 38313 | | || || || |||| ||||| || ||||| || |||| Sbjct 216086 CTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334919486154659