Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq126 116 3e-21 seq228 107 2e-18 seq65 93.3 4e-14 seq57 86.0 5e-12 >seq126 Length=3816233 Score = 116 bits (128), Expect = 3e-21 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 24996 ACAATGCAAATA----TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 |||||||| ||| ||||| ||||||||||| |||| ||||||| || | || || Sbjct 216032 ACAATGCAGATAGATCTTTGTGAAGACTTTGACTAGTAAGACCATCACCCTCAAGGTTGA 216091 Query 25052 GTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 | | |||||| ||| || | ||| || || ||||||||||| || || || Sbjct 216092 GCCCAGTGACACCATCAAGAATGTCAAGGTCAAGATTCAAGACAAAGAAGGCATCCCCCC 216151 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 |||||| || || | || |||||||| |||||| | ||||||| | | |||| ||| Sbjct 216152 TGACCAGAAGAGGCTGATCTTTGCCGGTAAACAACTGGAAGATGGGCTCCCTGT--CCGA 216209 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| ||||| ||||| || || | || || | |||||||||| Sbjct 216210 CTACAACATTCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTAAGAGGAGG 216263 >seq228 Length=1351672 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| |||| || || | ||||| | || || ||| | Sbjct 29383 AATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCAG 29324 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || ||| | || |||| |||| || ||||| || || || | |||| Sbjct 29323 TGACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCTGTCTGA 29267 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | ||||||||| ||||||| | || |||| ||||||| | || || Sbjct 29266 CCAGCAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTA 29207 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| ||||| ||||||||||| || || || ||||| Sbjct 29206 CAACATTCAGAAAGAATCCACCCTGCACTTGGTGCT 29171 >seq65 Length=8612916 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| |||| || || | | Sbjct 6272441 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 6272500 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | ||| | || |||||| ||| || || || || |||||||| Sbjct 6272501 GACACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 6272560 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||||||||||||||| | || |||| ||||| | || |||||| Sbjct 6272561 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACAAT 6272620 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGC 25209 ||||| ||||| ||||| || || || |||| Sbjct 6272621 ATTCAGAAAGAGTCCACCCTGCACTTGGTGC 6272651 >seq57 Length=10025392 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||| | || ||||| ||||| ||||| || || ||||||| || | |||||| | || Sbjct 1064481 ATGGAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCAAGGTGGAGCCA-CT 1064423 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | |||| | |||| |||| || || | || || || ||||||||||| Sbjct 1064422 GACACCACTGAGTGTCA-AAGCTAAAACCCAA-GATAGGGAGGGCATCCCACCTGACCAG 1064365 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | ||||||| ||||| | | ||||||| |||||| | || |||| | Sbjct 1064364 CAGAGTCTGATTTTTGTGAGCAAAGAGCTGGAAGATGGCCGCACTCT--CAGACTACACT 1064307 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||| ||||| |||| || ||| | ||| Sbjct 1064306 ATTCAGAAAGAGTCCATTCTGCATATGGTG 1064277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433292146035035