Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq67 192 7e-44 seq23 82.4 9e-11 >seq67 Length=8586409 Score = 192 bits (212), Expect = 7e-44 Identities = 313/444 (70%), Gaps = 5/444 (1%) Strand=Plus/Plus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATT 93138 ||| ||| || ||| ||||||| || ||||| | |||| || | || | || || Sbjct 7039058 TTGAACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTC-TGCTGATAAGTTCGTT 7039116 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 | |||||| | || || | |||||||| |||||||||||| ||||| | |||||| Sbjct 7039117 GGAGAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAAGA 7039176 Query 93199 ACCAGaaaaaaaTATACCTTCCA-CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG 93257 ||||||||| || || ||||||| | || ||||| ||||||| || ||| || | | Sbjct 7039177 ACCAGAAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGTGA 7039236 Query 93258 CGGAATTACTGCT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 | || | || |||||| | || ||||| || || || |||| |||||| | Sbjct 7039237 CCTC-TTGGTCCTCGATCCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCATG 7039295 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 || || | || || || || |||| | || | |||||| ||||| || || || Sbjct 7039296 GTCTCAGTGGCATTGAAAAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAATG 7039355 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 | ||| ||||||||||||||| | | ||||| | ||||||||| | |||||| || Sbjct 7039356 AGGAGACTATACATTTCAGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCAG 7039415 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| ||||||| |||||||| || | ||| || | |||||||| ||||| Sbjct 7039416 CGGGCTTCGATGATCTGAACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTATG 7039475 Query 93497 CCATCGGATGCTGCaaaaaaaGCC 93520 |||||| ||||||||| |||||| Sbjct 7039476 CCATCGCTTGCTGCAAAGAAAGCC 7039499 >seq23 Length=20579130 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/168 (73%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATT 93138 ||| |||| | ||| |||||||| || ||||| || ||| || | ||| | || Sbjct 7834495 TTGAACATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCACCTC-TGCTCCTCAGTTGGTT 7834553 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 | ||||| | || || | ||| ||| |||||||||||| |||||||| |||||| Sbjct 7834554 GGAGAATG--AGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAA-G 7834610 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 | || |||| || || |||||||| || ||||| || |||| |||||| Sbjct 7834611 AACATAAAAGAAGATTCCTTCCACTGCGGCAAACGCTACAACACGTTC 7834658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556813543400360