Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq228 129 5e-25 seq65 114 1e-20 seq68 102 7e-17 seq13 95.1 1e-14 seq109 93.3 4e-14 seq66 91.5 1e-13 >seq228 Length=1351672 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 29382 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCAGT 29323 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| ||||| |||||||||||||| || | | || || Sbjct 29322 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGTCTGACCAG 29263 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||| |||||||| | |||||| ||||| |||| || |||||| Sbjct 29262 CAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTACAAC 29203 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| |||||||||||| | || || || Sbjct 29202 ATTCAGAAAGAATCCACCCTGCACTTGGT 29174 >seq65 Length=8612916 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || || || | || || || || |||| || || || ||| ||| Sbjct 6272439 AGATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCA 6272498 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || | ||||| ||||| |||||| |||||| || || || || | Sbjct 6272499 GTGACACCACTGAGAGTGTCAAAACTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACC 6272558 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || || ||||||||||||||| | |||||| |||||| |||| || |||| Sbjct 6272559 AGCAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACA 6272618 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427 | ||||| ||||| |||||| | || || || Sbjct 6272619 ATATTCAGAAAGAGTCCACCCTGCACTTGGT 6272649 >seq68 Length=7962601 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || | Sbjct 2654383 AGATGCATATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCTTA 2654442 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||||| | || || |||| ||||| ||||||||||||| || || || || | Sbjct 2654443 GTGATACCATTGAGAATGTCAATGCTAAAATCTAAGACAAGGAGGGCATCCCGCCTGACC 2654502 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | | | ||| || ||| | ||||||||| |||||||| |||||| |||| | ||| Sbjct 2654503 AGTACCATCTGATTTTTTCGGGCAAACAGCTAGAGGATGGCCGCACTCTCTCAGGCCACA 2654562 Query 22397 ACATTCAAAAAGAATCCAC 22415 | ||||| ||||| ||||| Sbjct 2654563 ATATTCAGAAAGAGTCCAC 2654581 >seq13 Length=31322082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22292 ATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATAT 22351 || ||||| ||||| |||||||||||||| || | ||| || || || | ||| || | Sbjct 6776552 ATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTACCTGAACAGCAGCATCTGATCT 6776493 Query 22352 TTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAAT 22411 || ||||||||| |||||||| |||||| || | || ||||||||||| |||| | Sbjct 6776492 CTGTGGGCAAACAGCTAGAGGATGGCCGCACTCTCACAGACTACAACATTCAGAAAGTGT 6776433 Query 22412 CCACC 22416 ||||| Sbjct 6776432 CCACC 6776428 Score = 89.7 bits (98), Expect = 4e-13 Identities = 117/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||| | || |||||| ||| || ||| || || ||| | ||||| ||||||| Sbjct 6231655 TCACCCAGGAGGTGGAACCCAGTGACACCACTGAGAATGTCACAGCTAAAATCCAAGACA 6231596 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 ||||||| || | || || || || | ||| || | || ||||||||| | ||||| Sbjct 6231595 AGGAGGGCATCCTGCCTGACCAGCAGCATCTGATTTGTGTGGGCAAACAGATGAAGGATG 6231536 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 | |||| |||||||||||| ||||| |||||||||||| Sbjct 6231535 GCTGCACTCTCTCCGATTACAGCATTC--AAAGAATCCACC 6231497 >seq109 Length=4293992 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| | ||||| || || | || || || || |||| || || || || |||| Sbjct 3359778 AGATGCAGAACTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGACCA 3359837 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| ||| || ||||| ||||| |||||||||||||| || || || || | Sbjct 3359838 GTGACACCACGGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCGCCTGACC 3359897 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | | |||| || ||| ||||||||||| |||||| || |||| |||| | |||| Sbjct 3359898 AGTAGTGTCTGATTCTTGTGGGCAAACAGTTGGAGGATGACTGCAC--TCTCAAACTACA 3359955 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427 | | ||||| |||||| | || || || Sbjct 3359956 A----TAGAAAGAGTCCACCCTGCAATTGGT 3359982 >seq66 Length=8446781 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/211 (69%), Gaps = 14/211 (7%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || | |||| | ||| || || ||| Sbjct 470095 AGATGCAGATCTTTGTGAAGACCCTGACTGGCAAGTCCATCACCCCTGAGGTTGAGCCCA 470036 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || || ||||| ||||| |||||||||||||| || | Sbjct 470035 GTGACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCC--------- 469985 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||| || ||||| ||||||| | |||||||| |||||| |||| || |||| Sbjct 469984 -----CGTCTGATTTTTGCGGGCAAACGGCTAGAGGATGGCCGCACTCTCTCAGACTACA 469930 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427 | ||||| ||||| |||||| | || || || Sbjct 469929 ATATTCAGAAAGAGTCCACCCTGCACTTGGT 469899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419693271311785