Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq228 89.7 4e-13 seq19 82.4 6e-11 >seq228 Length=1351672 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| ||||||||||| || | ||| ||| ||| ||||| ||||| | Sbjct 29186 GTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCAAGCTGTTTGCTG 29245 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || |||||||| ||||| | | ||||| || ||||| || || ||| Sbjct 29246 GCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGGATTTTAGCTTTG 29305 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| ||||| || Sbjct 29306 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTC 29365 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 29366 TTCACAAAGATCTGCAT 29382 >seq19 Length=23049436 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATC---GTAGATTCTTTTTGAATGTTGTAATC 114211 ||| ||||| |||||||| || | ||| | || || || ||||||||| |||| || Sbjct 10825085 ACCACCACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTC 10825144 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 || ||| | |||||| ||||| || |||| |||| || | || || || || Sbjct 10825145 AGACAAAGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGG 10825204 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||| ||||| || || ||||| |||| | ||| | || || | || ||| Sbjct 10825205 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTC 10825264 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || |||||||| | ||||||||||| Sbjct 10825265 AACCTCGAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCAT 10825315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420099637685868