Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq67 141 2e-28 seq7 120 6e-22 seq23 91.5 3e-13 seq48 87.8 3e-12 >seq67 Length=8586409 Score = 141 bits (156), Expect = 2e-28 Identities = 303/445 (68%), Gaps = 11/445 (2%) Strand=Plus/Minus Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC-ACCAGGTTCATGA 42483 ||| ||||| || || || |||||||| ||||| ||| ||| | | ||| | Sbjct 7039499 GGCTTTCTTTGCAGCAAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGCGTT-AGCC 7039441 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 |||| || ||| | | || || ||||| |||||| ||||||| || |||| || || Sbjct 7039440 AAGAAGTTCAGATCATCGAAGCCCGCTGATTCTACAGCTTCCAAATTACCATGGAACACA 7039381 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGC 42600 | || ||||| |||| | || |||| |||| ||||| ||| || || Sbjct 7039380 TACATTCTGAAATGTAT---AGTCTCCTCATTGACACTTACATTAAAGATTCCAAGGAAA 7039324 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||||| |||| ||||| ||||| || ||||| |||||| ||||||| Sbjct 7039323 GGGATTTTCTTTTCAATGCCACTGAGACCATGCCTTGTGCCAAGAGGAAGGCAGACTGGG 7039264 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | | | ||||||||| | || | || | || || || | || || ||| ||| Sbjct 7039263 CCTTGCATTGGATCGAGGACCAAGAGGTCACCTGTGGAGAAAGTGTTGTGGCTTTTGCCG 7039204 Query 42721 CCGTCG-AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-A 42778 | || | | || |||||||| || || | || || | || |||||||||||| | | Sbjct 7039203 CAGTTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATTGATATTCTGGCTCAAGAAATGA 7039144 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 || | |||||| || ||||| ||||| |||||||| |||||||| || |||| |||| Sbjct 7039143 GGACT-GATGCCTGGCCTCACATTCTCCAACGAACTTATCAGCAGAGATAAGGGTTTGCA 7039085 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTC 42863 | ||||||||||||| ||||| Sbjct 7039084 CTGTCACTTTGCCTGCCTAGTGTTC 7039060 >seq7 Length=35612534 Score = 120 bits (132), Expect = 6e-22 Identities = 97/115 (84%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776 ||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||| || Sbjct 33433259 CCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGC 33433200 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 ||| | |||||| || ||||| ||||| ||||| ||||| ||||| || |||| Sbjct 33433199 GAGGCCT-GATGCCGGGCCTCACGTTCTCCAACGAGCTCATTAGCAGAGATGAGG 33433146 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| ||||| ||||||||||||||| |||||||||||||||||||||| || | Sbjct 33433756 CTCTTCAACGCCATCGAGACGATGCCCTGCGTCAAGAAGAAGGCGGACTGGGCCCTGCGC 33433697 Query 42669 TGGATCG 42675 ||||||| Sbjct 33433696 TGGATCG 33433690 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| || ||||| |||||||||||||| |||| || ||||||||||| ||||||||||| Sbjct 33431451 CCCGTTTGACTTCATGGAGAACATCTCCCTGGAAGGGAAGACCAACTTCTTCGAGAAGCG 33431392 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 33431391 GGTGGGCGAGTACCAG 33431376 >seq23 Length=20579130 Score = 91.5 bits (100), Expect = 3e-13 Identities = 243/361 (67%), Gaps = 19/361 (5%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT--CA 42666 || ||||| ||| ||||||||||||| || ||||||| || | |||||| || | Sbjct 7834745 CTCTTCAATGCCGTGGAGACGATGCCTTGTGCCAAGAAG---GCAGCCTGGGC-CTGGCG 7834690 Query 42667 ACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 | ||||| | | || || | | || || | | ||||| ||| |||| || | Sbjct 7834689 A-TGGATGGGGCACAATGAGGCCGCCTGTGGAGAACGTGTTGTAGCGTTTGCCGCAGTGG 7834631 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-- 42784 | || |||||||| | | | || || || || |||||||||||| | | | | | Sbjct 7834630 AAGGAATCTTCTTTTATGTT-CTTTTGCGTCAATATTCTGGCTCAAGAA--ATGAGACCT 7834574 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 | |||| || |||| ||||| ||| |||| | ||||| | ||||| |||| | || Sbjct 7834573 GGTGCCTGGCCTCA--TTCTCCAACCAACTGAGGAGCAGAGGTGAGGGTTTGCACTGAGA 7834516 Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904 |||||||||||| ||||| | ||||| |||||| || || || || |||| | Sbjct 7834515 CTTTGCCTGCCTGATGTTC---AAACACCTGCTGCACAAACCTTCAGAGCAGAGGGT--G 7834461 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 | ||||| | || ||| ||| ||| ||||||||||||| || | |||| || Sbjct 7834460 AAAGAGAATCACCAACGCAGTGAGGATAGAGCAGGAGTTCCTCACAGAGGCCTTGCCAGT 7834401 Query 42965 G 42965 | Sbjct 7834400 G 7834400 >seq48 Length=11824846 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || |||||||| || | || || Sbjct 3086621 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCATTTGCT 3086680 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||| | ||| | | |||| | |||||| ||||||||||| || || ||||| Sbjct 3086681 GCTATATTCTGGTTAAAGAAAAGAGGTCT-GATGCCTGGACTCACCTTTTCCAATGAACT 3086739 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 3086740 CATCAGCAGAGATGA 3086754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944259061014640