Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq186 113 1e-19 seq19 111 4e-19 seq228 105 2e-17 seq175 96.9 8e-15 >seq186 Length=2028101 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || || || || ||||| | || || || || ||| Sbjct 786244 TCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAG 786185 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||| ||||||||||| || |||||||| || Sbjct 786184 ATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTCACATTC 786125 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || | || | || || ||||| ||||| || ||||| ||||| ||| Sbjct 786124 TCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 786065 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 786064 AAGATTTGCATTTTG 786050 >seq19 Length=23049436 Score = 111 bits (122), Expect = 4e-19 Identities = 163/230 (71%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATC---GTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | || ||||||| ||| || ||||| || | ||||| Sbjct 10825086 CCACCACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCA 10825145 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | ||| |||| ||||| | ||| || | || ||||| || | || ||| | Sbjct 10825146 GACAAAGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGA 10825205 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||||||||| || || || || |||||||| | ||| | ||| Sbjct 10825206 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 10825265 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| |||||||| || ||||| || | ||| |||||||| Sbjct 10825266 ACCTCGAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCAT 10825315 >seq228 Length=1351672 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||| | ||| ||||| || || || | ||||| | || || Sbjct 29191 TTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCAAGCTGTTTGCTGGCAAA 29250 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||||||||| || | |||| || || || || |||||||| ||||| || || Sbjct 29251 AATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATT 29310 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || || || ||||| ||||| || ||||| ||||| || Sbjct 29311 CTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTCTTCAC 29370 Query 288462 GAATATCTGCATT 288474 || ||||||||| Sbjct 29371 AAAGATCTGCATT 29383 >seq175 Length=2568445 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || ||||||| | | || ||||| || || ||||| | | || | Sbjct 778872 AGTCTCAACACAAGATGAAGCAGGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAC 778813 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | ||| || || || |||||||| || ||| | || |||||||| Sbjct 778812 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCC 778753 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||||||||| || || || || |||||||| | ||| | ||| || | ||| ||| Sbjct 778752 TTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTTGAGAGTG 778693 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || || || || || ||||| || Sbjct 778692 ATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGTAT 778655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179551788867942