Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq186 104 3e-17 seq65 104 3e-17 seq228 98.7 1e-15 seq91 93.3 5e-14 seq161 89.7 6e-13 seq85 89.7 6e-13 seq28 89.7 6e-13 >seq186 Length=2028101 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| |||| ||| ||| || || || ||||| |||| ||||| || | || || Sbjct 786262 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCC 786203 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| ||||| || ||||| | ||||||||| | || | || ||||| ||| | Sbjct 786202 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 786143 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || ||| | || | | || || || | |||| || | |||||||| ||| Sbjct 786142 ATCTTGGCTTTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTG 786083 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 || || || ||||| || |||||||||||||| || Sbjct 786082 CCAGTCAGGGTCTTCACGAAGATTTGCATTTTGAC 786048 >seq65 Length=8612916 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| |||| ||| ||| || ||||||||||| || | || || || | || || Sbjct 6272650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTC 6272591 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||| || || || || || || ||||||||||| | || | || |||| ||| Sbjct 6272590 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 6272531 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| ||||| || | ||||| || | ||| || |||| |||||||| || Sbjct 6272530 GATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 6272471 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || ||||| ||||| Sbjct 6272470 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq228 Length=1351672 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| |||| ||| || || ||||| ||||| || | ||||| || | || || Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTC 29232 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||| || | || || || || ||||||||||| | | | || ||||||||| Sbjct 29233 AAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTG 29292 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| ||||| || | | ||||| || | || || || | ||||| || || Sbjct 29293 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTT 29352 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATTT 42210 ||| || || ||||| |||||||| ||||||| Sbjct 29353 GCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq91 Length=5537469 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 4091666 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 4091607 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 4091606 TATACTAACGAGGA 4091593 >seq161 Length=2648914 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1353351 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1353410 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1353411 TACTAACGAGGA 1353422 >seq85 Length=5852886 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 375616 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 375557 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 375556 TACTAACGAGGA 375545 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 416210 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 416151 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 416150 TACTAACGAGGA 416139 >seq28 Length=17803559 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 15033785 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 15033844 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 15033845 TACTAACGAGGA 15033856 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 13119388 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 13119447 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 13119448 ATACTAACGAGGA 13119460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543166701603760