Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq186 125 7e-24 seq4 125 7e-24 seq228 116 4e-21 seq19 105 7e-18 seq65 104 2e-17 seq175 93.3 4e-14 seq49 89.7 5e-13 seq127 87.8 2e-12 seq126 86.0 6e-12 seq14 86.0 6e-12 >seq186 Length=2028101 Score = 125 bits (138), Expect = 7e-24 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||||||| || | | || || | ||||| ||||||||||| Sbjct 786250 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCA 786191 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| ||||| || ||||| || || || || || ||||| Sbjct 786190 GCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTG-GCTTT 786132 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| ||| | ||||||| || |||| || | || | ||||||||| |||| || Sbjct 786131 CACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 786072 Query 64426 TTTTACGAAAATTTGCATTTT 64446 || ||||| ||||||||||| Sbjct 786071 CTTCACGAAGATTTGCATTTT 786051 >seq4 Length=40935223 Score = 125 bits (138), Expect = 7e-24 Identities = 150/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||| ||| || | | ||| || | ||||| ||||||||||| Sbjct 7265329 GTGGACTCTTTCTGGATGTCGTAGTCAGAGT--GTG-GC-CATCTTCCAGCTGCTTGCCT 7265384 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||||||||| || ||||| || ||||| || || ||| Sbjct 7265385 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCTTGGATCTTGGCCTTC 7265444 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | ||||||| | || | || | ||| | |||||||||||||| || Sbjct 7265445 ACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTCTTGCCGGTCAGGGTC 7265504 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| ||||||||||| Sbjct 7265505 TTCACGAAGATTTGCATTTT 7265524 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| | | || ||| |||||||||| || | | || ||| | Sbjct 21336379 TCTCAACACAAGATGAAGAGCACACTCCTTTAGAATGTTGTAGTCAGACAAAGTACGCCC 21336438 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| |||| || | ||||| |||||||||||||| || Sbjct 21336439 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGAAGAGGAGGAATTCCTTCCTT 21336498 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 | || || || ||| | | || |||||||| || || || || | ||| | Sbjct 21336499 AACCTGGATCTTGGCCTTCATATTTTCTACTGTATCTGAGGGTTCAACCTCGAGAGTGAT 21336558 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGC 64441 |||||| || || | ||||| | |||||| ||| Sbjct 21336559 GGTCTTCCCTGTGAGGGTTTTCATGAAAATCTGC 21336592 >seq228 Length=1351672 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | || | || |||||||| ||||||||||| |||| || ||||| | || Sbjct 29170 AAGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATC 29229 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||| |||| |||| |||| || ||||||||||| | | || || || || || Sbjct 29230 CTCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTC 29289 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | |||| ||||| ||| ||| | || |||| || || || || | || | | Sbjct 29290 TTGGA-TTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAG 29348 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 ||||||| |||| || || || || || ||||||| Sbjct 29349 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq19 Length=23049436 Score = 105 bits (116), Expect = 7e-18 Identities = 164/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATC---GTCGATTCTTTTTGAATGTTGTAATC 64272 ||| || || | ||| | ||| ||||||| || || || ||||||||| |||| || Sbjct 10825085 ACCACCACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTC 10825144 Query 64273 TGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGG 64332 | | ||| | | ||||| || |||||| | ||| | || || | ||||| || || Sbjct 10825145 AGACAAAGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGG 10825204 Query 64333 AGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTC 64392 |||||||||||| || || || || || ||||||| || | |||||| || || Sbjct 10825205 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTC 10825264 Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | ||| | |||||| || || | |||||| | |||||| ||||| || Sbjct 10825265 AACCTCGAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq65 Length=8612916 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| ||||| ||||| |||| || ||||| | || || ||||| |||||| Sbjct 6272637 GTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTGTTTGCCG 6272578 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || ||||||||||| || || || || || ||||| ||||| || Sbjct 6272577 GCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGGATTTTAGTTTTG 6272518 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| || |||| || || || || | || | ||||||||| |||| || Sbjct 6272517 ACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 6272458 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 6272457 TTCACGAAGATCTGCAT 6272441 >seq175 Length=2568445 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| | || || |||||||||||||| || | | || | | | Sbjct 778870 TCTCAACACAAGATGAAGCAGGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACACCC 778811 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| | || || ||||| || |||||||||||||| || Sbjct 778810 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTT 778751 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || | ||||| || || || | | ||| | Sbjct 778750 ATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTTGAGAGTGAT 778691 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || || | ||||| || ||||| || || || Sbjct 778690 GGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGTATCTT 778652 >seq49 Length=11612304 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/235 (69%), Gaps = 9/235 (4%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| ||||||| ||| || | |||||||||||||| || | Sbjct 472386 ACCACCACGAAGTCTCAACACAAGATGAAGCGTGGACGCCTTTTGAATGTTGTAGTCAGA 472445 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || ||| |||||| || |||||||| || || | |||||||| ||||| Sbjct 472446 CAAAGTACGCCTGTCTTCCAGTTGCTTGCC-----AACAAAGTCTTTGCTGGTCAGGAGG 472500 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || | || ||||||| || | |||||| || || | Sbjct 472501 AATTCCTTCCTTATCCTGGCTCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGC 472560 Query 64396 TTCTACAGTTACGGT----CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | | ||| | ||| ||| || || | ||||| |||||||| ||||| || Sbjct 472561 CTTGAGAGTGATGGTCTTCCTTCCCTGTTAGGGTTTTCACGAAAATCTGCATCTT 472615 >seq127 Length=3912380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| ||||||| || || || |||||||||||||| || | Sbjct 1383994 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1384053 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | |||||| || |||||| | | | | || || | ||||| || ||||| Sbjct 1384054 CAGAGTATGTCTGTCTTCCAGTTGCTTGACAGAA-AGATCAGTCTTTGCTGATCAGGAGG 1384112 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCC-A 64394 ||||||||| || || | || || ||||||| | | |||||| | | |||| | Sbjct 1384113 AATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATC-CAAGGGTCCAA 1384171 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | | | ||| | |||||| || || | ||||| || ||||| ||||| || Sbjct 1384172 CCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223 >seq126 Length=3816233 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/191 (70%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| ||||||||||| || ||| | | || | ||||| || || || ||| Sbjct 216233 GTGGACTCTTTCTGAATGTTGTAGTC--GGACAGGGAGCCCATCTTCCAGTTGTTTACCG 216176 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| || |||||| || || || |||||||| ||||| || || ||| Sbjct 216175 GCAAAGATCAGCCTCTTCTGGTCAGGGGGGATGCCTTCTTTGTCTTGAATCTTGACCTTG 216116 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || || || | | || | |||||| | |||||||| Sbjct 216115 ACATTCTTGATGGTGTCACTGGGCTCAACCTTGAGGGTGATGGTCTTACTAGTCAAAGTC 216056 Query 64427 TTTACGAAAAT 64437 || || || || Sbjct 216055 TTCACAAAGAT 216045 >seq14 Length=29593583 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || || || |||||||||||||| || | | || || | Sbjct 11200234 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGCCC 11200293 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 | ||| || |||||||| ||| | || || | ||||| || |||||||||||||| || Sbjct 11200294 ATTTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 11200353 Query 64348 TTCTTGTATTTTTTGCTTTACA 64369 || || || || ||||||| Sbjct 11200354 ATCCTGGATCTTGGCCTTTACA 11200375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499602398893160