Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq34 140 5e-28 >seq34 Length=16311045 Score = 140 bits (154), Expect = 5e-28 Identities = 200/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 || || || ||||| || || ||||| |||||||||| || || || | ||| | Sbjct 10486540 GGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGGAGGCAGTATTGATGATTTTA 10486599 Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013 ||||| || || ||||| || ||||| ||||||||||| || || || || || Sbjct 10486600 AAACCCACTTCACCGCCAAAAGTGCTAGGTTTCCAGTAGTGAGGAGAACATATAGGATTG 10486659 Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 |||| || || ||||||||||| || || || || || | ||| ||||||| |||||| Sbjct 10486660 CCCATCAGTCCCTTCAAGGAAAAGGGGGCTCCGAGTTCTACCATGGTCTCACCAAAGATG 10486719 Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133 | | || || || | ||| || | | | ||| || || || | || || | ||| Sbjct 10486720 CTATCTGGGCGAGGCTCTTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 10486779 Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 |||||||| |||| ||||||||||| || |||||||| ||| Sbjct 10486780 CCATAGAGCTCTTCTAACTCGGCAGCCATTTCCTTCTCTCCT 10486821 Score = 113 bits (124), Expect = 7e-20 Identities = 188/270 (70%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 9452 TGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATGGAATTGTTGTAAACGA 9511 |||| |||||||| ||||||| || || || | || | | ||||||||||| | | Sbjct 10487516 TGAATGATTCAACAAATTGGGTAATGCCATGTTCCATTAATAAAGAATTGTTGTAGAGAA 10487575 Query 9512 AGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCAGGCAACAGAGAATGCC 9571 | |||| || | |||| | ||| | || |||| ||||||| || | |||| Sbjct 10487576 ACTGTTGATAGCTGTACTCCTGGTCATCAATTTGAAAGGTGTCAGGCAGAAGGGGGTGCC 10487635 Query 9572 AGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTACTGAAA--GGCGGTACC 9629 || |||||||||| || ||||| || || || ||||| |||||||| || | ||| Sbjct 10487636 AGTGGTAGAGGGTGTTAAACTCAGCAGCGATGCGGTTTTGGTACTGGAATTGTTGGT--T 10487693 Query 9630 GAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCTGAGTTGCTGGACATA 9689 ||| || | ||| |||||||| | || | |||||| || || || | ||||| ||||| Sbjct 10487694 GAAGAGCAGCTCTGGGTCAAACTTCAGTTTGAAGTGATAGCCACTCAAGTGCTGTACATA 10487753 Query 9690 CTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | || | ||| ||||| ||||| || Sbjct 10487754 GTCTTCAATCACAATCTTAATAGTTTCTCC 10487783 Score = 113 bits (124), Expect = 7e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | ||||| ||||||||| || || ||||| |||| ||| || Sbjct 10489814 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGACACAGGAGGAAGAGCTCTGGTG 10489873 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| ||||||||||| ||||||||||| || |||||||| | | || || Sbjct 10489874 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCATAGTGTGCATTATAAGTT 10489933 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || |||||||||| | || |||||| Sbjct 10489934 GGTGGGCTGTCAATCAAATGTGATCTGGCT 10489963 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174 |||| |||||||||||| |||| |||| | || ||||| ||||||||| ||| || Sbjct 10489196 GTTCTATCTTACCCCATGACCCAGTCCTTTAGTAAAAGCTGGTCCTCGCTTATGATCTGT 10489255 Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234 | | ||||| || || || ||||| || | || || |||||||||| || |||||||| Sbjct 10489256 CTTGAAAAACTGATGGGTGAAGTGCTGGGCAAAGAATGCGAACATCAAATTTGTGCCCTG 10489315 Query 10235 GGGATCGGGGATAAA 10249 |||||| || || || Sbjct 10489316 GGGATCAGGAATGAA 10489330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723666582632600