Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq57 96.9 6e-15 seq7 86.0 1e-11 >seq57 Length=10025392 Score = 96.9 bits (106), Expect = 6e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| || ||||||| ||| || || || || | Sbjct 63652 CCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 63711 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | |||||||||||||||||||| || ||||||| | | || || ||||| |||| || Sbjct 63712 GGATGTTCAGAGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAA 63771 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||| ||||| || || ||||| ||||| || Sbjct 63772 CGGTTTTCTGAGAGATTTCCCATACCGTTTT 63802 >seq7 Length=35612534 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 159959 ATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATG 160018 |||| ||||||||| | ||||||||||||| | || ||| |||||||| || ||| Sbjct 33433160 ATGAGCTCGTTGGAGAACGTGAGGCCCGGCATCAGGCCTCGCTTCTTGAGCCAGAAGATG 33433219 Query 160019 GCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGA 160070 | ||| || | ||| || ||||| ||||||||||| || |||||||||| Sbjct 33433220 GACGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAACGCCACGA 33433271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795087721141840