Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq65 113 5e-20 seq186 109 6e-19 seq228 105 8e-18 seq4 93.3 5e-14 >seq65 Length=8612916 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || ||| || || ||||||||||| || || ||||| | || || Sbjct 6272650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTC 6272591 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| |||||||| || |||| |||||||||||| | ||| | || |||| ||| Sbjct 6272590 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 6272531 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || | |||| || | ||||| || | ||| || || | |||||||| || Sbjct 6272530 GATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 6272471 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||| ||||| Sbjct 6272470 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq186 Length=2028101 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || ||| || ||||| |||||||| || ||||| || | || || Sbjct 786262 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCC 786203 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | | ||||||||| | || | || ||||| ||| | Sbjct 786202 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 786143 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| || | || | | || || || | |||| |||| |||||||| ||| Sbjct 786142 ATCTTGGCTTTCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTG 786083 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || ||||| || || || ||||||||||||||| Sbjct 786082 CCAGTCAGGGTCTTCACGAAGATTTGCATTTTG 786050 >seq228 Length=1351672 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || || |||||||| || |||||||| | || || ||||| |||| ||| || Sbjct 29192 TCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCAAGCTGTTTGCTGGCAAAA 29251 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | | | | || ||||||||| ||| || |||| || Sbjct 29252 ATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTC 29311 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || | || || || | ||||| || ||||| ||||| || || ||| Sbjct 29312 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTCTTCACA 29371 Query 46583 AAGATTTGCATTT 46595 ||||| ||||||| Sbjct 29372 AAGATCTGCATTT 29384 >seq4 Length=40935223 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| |||| || ||| || ||||| | |||||| Sbjct 7265298 GCCACCCCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTC--- 7265354 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||| | | || || ||||||||||| || || || | | ||||||||||| || Sbjct 7265355 -AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGG 7265413 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||| || |||||| ||| | || | | || || || || | Sbjct 7265414 GATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGTGCTCAGC 7265473 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || || ||||||||||||||| Sbjct 7265474 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 7265525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565190432456280