Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq228 123 2e-23 seq65 111 1e-19 seq126 100 2e-16 seq68 84.2 1e-11 >seq228 Length=1351672 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||||||||||||||| ||||| || || | || |||| || Sbjct 29174 ACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCA 29233 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| | |||||| || || || |||||||| | | | ||||||||||| Sbjct 29234 AGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGG 29293 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || |||||| || | ||| || || | Sbjct 29294 ATTTTAGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCT 29351 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || |||||||||||||||||||| Sbjct 29352 TGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq65 Length=8612916 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||||||||||| || ||||| || || | || |||| ||| Sbjct 6272649 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTCC 6272590 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || || |||||||| |||| | |||||| ||| Sbjct 6272589 AGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGG 6272530 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | | | |||| || || || |||| ||| ||||| || Sbjct 6272529 ATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTG 6272470 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 6272469 CCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq126 Length=3816233 Score = 100 bits (110), Expect = 2e-16 Identities = 159/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || || | || |||| ||| | ||| |||||||||||||| ||||| || Sbjct 216263 CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAC 216204 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | |||| ||||| ||||| |||||||| || || | | |||||| | || Sbjct 216203 AGGGAGCC--CATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGGG 216146 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || || ||||| |||||| ||||| || || || | |||| || ||||| Sbjct 216145 ATGCCTTCTTTGTCTTGAATCTTGACCTTGAC--ATTCTTGATGGTGTCACTGGGCTCAA 216088 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCT 34977 | | || ||| ||||| || | || | ||||||||||||||||| Sbjct 216087 CCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 >seq68 Length=7962601 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 34777 AGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCT 34836 |||| | |||| ||||||||||| || | | | || || | || |||| || |||| Sbjct 2654589 AGTGCAGTGTGGACTCTTTCTGAATATTGTGGCCTGAGAGAGTGCGGCCATCCTCTAGCT 2654530 Query 34837 GTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCT 34896 |||| || | ||| || || | | |||||| |||| | ||||||||||| || | Sbjct 2654529 GTTTGCCCGAAAAAATCAGATGGTACTGGTCAGGCGGGATGCCCTCCTTGTCTTAGATTT 2654470 Query 34897 TCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCC 34954 | ||||| || || || | |||| |||||| || | ||| ||||| || || Sbjct 2654469 TAGCATTGAC--ATTCTCAATGGTATCACTAAGCTCAACCTCAAGGGTGATGGTCTTGCC 2654412 Query 34955 CGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||||||||||||| ||||| Sbjct 2654411 AGTCAGGGTCTTCACAAAGATATGCAT 2654385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324606739511592