Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq67 201 1e-46 seq48 129 7e-25 seq57 102 9e-17 >seq67 Length=8586409 Score = 201 bits (222), Expect = 1e-46 Identities = 520/786 (66%), Gaps = 11/786 (1%) Strand=Plus/Plus Query 18609 TGGTTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCC 18666 || ||| || ||| ||||||| | |||||| |||||| | || || ||| |||||| Sbjct 7038718 TGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTG--TCCGACTTGACATCACTCCC 7038775 Query 18667 ATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATA 18726 || | ||||| || | ||||| || |||||||| || | | || | || | | ||| Sbjct 7038776 ATCCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTTCATCCTCCCTTGTAGTTAAATA 7038835 Query 18727 CATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAAT 18786 ||||| || |||| || ||||| ||| | || |||| | | || | Sbjct 7038836 TTCTCCATGAAGTCAAGTGCATTTTCTACTCAGAAGGCCTTACTGAAATCCAGCTCCAGC 7038895 Query 18787 AGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATT 18846 | ||||| || || | |||| ||| | |||| | | ||| |||| || || Sbjct 7038896 ATGAGTCTGTCAGCCATGAATTCAATGCACCGCGTCATTAAAGTACAGCTCATCCCAATG 7038955 Query 18847 AATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATA 18906 | || | || | || ||||| || || || || |||| | || || | | || Sbjct 7038956 AGCTTCCCTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTAGCCTGACAGCATTGGTGATT 7039015 Query 18907 ATAGATACAACTCTATCTTCATTAGGAGGGTA---TAGAAGATGTTTAAACATCAAACAT 18963 || | |||| || | || | ||| | ||| | ||||| |||| | || Sbjct 7039016 ATTTCTTTCACTCA--CTGC-TTGGAAGGTTTGCGTAGCTGGTGTTTGAACACTAGGCAG 7039072 Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023 ||||| | ||| || | |||| ||||| || || | ||| || || ||||| | ||| Sbjct 7039073 GCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCGTTGGAGAATGTGAGGCCA 7039132 Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATA 19083 ||||||||||||| ||| || | ||||||||| | ||||| || ||||||||||| || Sbjct 7039133 GGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAAAGAAGATT 7039192 Query 19084 CCTT-CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAAT 19142 |||| | ||||| |||||||| || | ||||||||| | | | || | | | || Sbjct 7039193 CCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCCACAGGTGACCTCTTGGTCCTCGAT 7039252 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAA 19202 ||| | || ||||| || |||||| | || |||| ||||| ||||| | | ||| || Sbjct 7039253 CCAATGCAAGGCCCAGTCTGCCTTCCTCTTGGCACAAGGCATGGTCTCAGTGGCATTGAA 7039312 Query 19203 TAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTC 19262 ||| | | || | | |||||||| || | || || | | ||| |||||||| Sbjct 7039313 AAGAAAATCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTC 7039372 Query 19263 TGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTG 19322 ||||| || | ||| || | || || || | ||| || || | ||||| | ||||| Sbjct 7039373 AGAATGTATGTGTTCCATGGTAATTTGGAAGCTGTAGAATCAGCGGGCTTCGATGATCTG 7039432 Query 19323 TACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAA 19382 ||||| | || | || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 7039433 AACTTCTTGGCTAACGCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAA 7039492 Query 19383 AAATGC 19388 || || Sbjct 7039493 GAAAGC 7039498 >seq48 Length=11824846 Score = 129 bits (142), Expect = 7e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | ||||||||||| |||||||| ||| Sbjct 3086754 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3086695 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 ||||||||||||| |||||||||||| || ||||| || |||||||| || ||||| || Sbjct 3086694 AACCAGAATATAGCAGCAAATGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 3086635 Query 19105 ACTAGTCTTTCTCC 19118 || | ||||| || Sbjct 3086634 ACCACCCTTTCCCC 3086621 >seq57 Length=10025392 Score = 102 bits (112), Expect = 9e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | |||||| || | Sbjct 63658 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 63717 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | ||||| || || |||||||| || |||||||| || |||||||| | | || Sbjct 63718 TCAGAGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 63777 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || |||||||| |||||||||| ||| || | ||| || || Sbjct 63778 TCTGAGAGATTTCCCATACCGTTTTATAAAGTTGCTTCAGGTCATCAGG 63826 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | |||||||| | || || || || ||||| ||||| || || Sbjct 65923 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 65982 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||| | ||| |||||||| || || |||||||| | |||| | ||| || Sbjct 65983 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 66042 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 66043 TTTCTTATACCATA 66056 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || ||||| ||||| ||||||| |||| || | | || Sbjct 90059 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 90118 Query 48660 TATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 |||||||||||| ||| ||| ||||| || || || || | |||||| | ||| ||| Sbjct 90119 TATGTTTCAATAGCAGCATCGATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 90178 Query 48720 ATATATTGAGGTCTTTCA 48737 |||| ||| ||||||||| Sbjct 90179 ATATGTTGTGGTCTTTCA 90196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562061098041960