Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq17 122 7e-23 seq6 87.8 1e-12 >seq5 Length=37766398 Score = 140 bits (154), Expect = 3e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 25977066 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 25977125 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || ||||||||||| | |||| |||||| ||||| || || ||||| |||| | Sbjct 25977126 ACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 25977185 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030 ||||| ||||| || | || ||||| ||||| || |||||| Sbjct 25977186 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATG 25977227 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| ||||| || |||||||||||||| || || || || || || | ||| Sbjct 25979479 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTC 25979538 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||| |||| ||| ||| ||| |||||| ||||| | ||| ||||||||||| Sbjct 25979539 TCCTTCTTTTCTGCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTC 25979598 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||| || || ||||| || || ||||| | || ||||| || Sbjct 25979599 CCAGATTTTCACTCCCTTAGACGACAGTTCTTTAGCATTCGTGGATCC 25979646 >seq17 Length=24042557 Score = 122 bits (134), Expect = 7e-23 Identities = 179/247 (72%), Gaps = 11/247 (4%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || || ||||| |||| || | |||||| | Sbjct 9080812 ATGAGCTCCTTTTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAACCCTGTCCTT 9080871 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| ||| |||| |||| ||||||||||| ||||| |||||||| ||||||| || Sbjct 9080872 TAAAGGCCTACTCTTCACGGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATT 9080931 Query 112200 CTGCTTGCC-TCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGC 112258 ||| || || |||| |||||| ||| | ||||| | | || | || || || || | Sbjct 9080932 CTGTTTACCTTCTG-CTGAAGTCGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCC 9080990 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 112316 || ||| |||| ||||| |||||||| || | |||||||||| ||| ||||| Sbjct 9080991 TGAG------CGGAGGCCAAGGCAGGTCTCCGTTCTTGCGGATGCCCATGTTCTGGGACA 9081044 Query 112317 CA-CGGC 112322 || |||| Sbjct 9081045 CAGCGGC 9081051 >seq6 Length=37047529 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || || ||||| |||| || |||||||| | | ||| | | |||| ||||| Sbjct 26345686 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGACTCTTCTCGGGA 26345745 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||| ||||| |||||||| ||||||| ||||| || ||| Sbjct 26345746 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 26345793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408583790596697