Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq126 84.2 2e-11 >seq126 Length=3816233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/244 (68%), Gaps = 9/244 (4%) Strand=Plus/Minus Query 101233 CTAGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATT 101292 ||||||| ||||||||||| || | || | || || || || ||||| || || || Sbjct 216270 CTAGACA---CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTT 216214 Query 101293 GTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTG 101352 ||| |||| | | | |||| |||| ||| ||||| ||||| |||| | || || Sbjct 216213 GTAGTCGGACAGGGAGCC--CATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTG 216156 Query 101353 ATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 || || || ||||||||||| |||||||| || || ||| | | | |||||| Sbjct 216155 GTCAGGGGGGATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACT 216096 Query 101413 CGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA----TATCTGCA 101468 | || || | || |||| || || | || ||||| || ||||| |||||||| Sbjct 216095 GGGCTCAACCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCTATCTGCA 216036 Query 101469 TGGT 101472 | || Sbjct 216035 TTGT 216032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396245611553673