Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq179 179 7e-40 seq137 145 1e-29 seq23 122 2e-22 seq67 111 3e-19 seq7 107 4e-18 seq10 91.5 3e-13 >seq179 Length=2161547 Score = 179 bits (198), Expect = 7e-40 Identities = 188/245 (77%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 241385 AGCTGCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCT 241442 ||| |||| ||||| | || ||||| | || ||||| ||||||||| |||||||||| Sbjct 1936004 AGCAGCTGGCAGCCGTTGCTGACATGGGTCAT--GACCTTCTGTTTGAGCTGGGCCACCT 1936061 Query 241443 GGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCA 241502 | ||||| || | | || || | || || || ||||| || | |||||| ||||| Sbjct 1936062 GCTCCCGGAGGAGGCCTGCAGTGCTCGAGAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCA 1936121 Query 241503 CTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCA 241562 | || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| Sbjct 1936122 CCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCA 1936181 Query 241563 AGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCG 241622 |||||||| || | ||| || ||| | |||||||| |||||||| ||||||| ||| | Sbjct 1936182 GCCGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATGTTGATGG 1936241 Query 241623 GAGAC 241627 ||||| Sbjct 1936242 GAGAC 1936246 >seq137 Length=3308036 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| |||||||| |||||||| || ||||| | | |||||| | ||| Sbjct 2623002 AGGACCTTCTGCTTGAGTTGCGCCACCTGCTCACGCAGCAGGCTCGCGGTGGACGCCAGC 2622943 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | ||||||| ||||||||||||||| || |||| |||||||||||| Sbjct 2622942 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGTTCCAGC 2622883 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| || || |||| ||| || | |||||| || || | ||| || ||||| ||| Sbjct 2622882 TTGCGCTTTCGACACTTGGAGGCAGCGATGCGGTTGCGTAGCCGCTTGCGCTCCGCTTTG 2622823 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| || || ||||||||||| || ||| Sbjct 2622822 ATGCGCTCTTGAGTGTCCATGTCGATGGGCGAC 2622790 >seq23 Length=20579130 Score = 122 bits (134), Expect = 2e-22 Identities = 359/543 (66%), Gaps = 23/543 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || |||||||| |||||||||||||| ||||||| || | || || ||||| Sbjct 7834220 CTGATACTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTCTAGTGAAATATTCTC 7834279 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| || || | | | | |||| || | || | | |||||| Sbjct 7834280 CATGAAGTCAAATGGACTTTCTAC-TCGGAAACCCTTGCTAAAACC--CCGCTCCAGC-- 7834334 Query 47959 GTGA-----TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 |||| |||| ||| | || ||||| || || || ||||| || ||| Sbjct 7834335 GTGAGTCTGTCCGTCACGAATTCAATGTACCCCTTCACCAGAGTACACTTCATCCCAATG 7834394 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | ||| ||||| |||| |||||| ||||||| ||||||| ||| || | | Sbjct 7834395 AAATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCTCACTGCGTTGGTGATT 7834454 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| || || | |||||| ||||||| ||||||| ||| | | || |||| Sbjct 7834455 CTCT--TTCACCCTCTGCTCTGAAGGTTTGTGCAGCAGGTGTTTGA---ACATCAGGCAG 7834509 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| | |||||| || || | | ||| | || ||||||||| ||| ||| Sbjct 7834510 GCAAAGTCTCAGTGCAAACCCTCACCTCTGCTCCTCAGTTGGTTGGAGAA--TGAGGCCA 7834567 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 |||| | | | | ||||||||||| |||| ||| ||||| || | |||||||| Sbjct 7834568 GGCACCAGGTCTCATTTCTTGAGCCAGAATATTGACGCAAAAGA-ACATAAAAGAAGATT 7834626 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || |||||||| || ||||| | | ||||| | | || | |||| ||| Sbjct 7834627 CCTTCCACTGCGGCAAACGCTACAACACGTTCTCCACAGGCGGCCTCATTGTGCCCCATC 7834686 Query 48314 CA-GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 || | || |||||| |||| ||||||| || ||||||||||| | ||| ||| Sbjct 7834687 CATCGCCAG-GCCCAGGCTGC---CTTCTTGGCACAAGGCATCGTCTCCACGGCATTGAA 7834742 Query 48373 GAG 48375 ||| Sbjct 7834743 GAG 7834745 >seq67 Length=8586409 Score = 111 bits (122), Expect = 3e-19 Identities = 249/367 (68%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 48003 TCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGG 48062 |||| || ||||| | | ||||| |||| |||||| ||||||| ||||| | || | Sbjct 7038945 TCATCCCAATGAGCTTCCCTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTAGCCTGACAG 7039004 Query 48063 CTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT 48122 | | | || | || || | || || |||||| || |||| ||| Sbjct 7039005 CATTGGTGATTATTTCTTTCACTCACTGCTTGGAAGGTTTGCGTAGCTGGTGTTTGA--- 7039061 Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 | | | ||||||||||| | |||||| || | || | |||||| || ||||||||| Sbjct 7039062 ACACTAGGCAGGCAAAGTGACAGTGCAAACCCTTATCTCTGCTGATAAGTTCGTTGGAGA 7039121 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | ||| |||||||| | || | | ||||||||||| || || ||||| |||| Sbjct 7039122 ATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATCAATGCAAAAGAACCAG 7039181 Query 48243 AGAAGAAGATGCCCTCC-ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 | |||||||| || ||| ||||| || || || | || ||||| | || | || Sbjct 7039182 AAAAGAAGATTCCTTCCAACTGCGGCAAAAGCCACAACACTTTCTCC-ACAGGTGACCTC 7039240 Query 48302 TT-GTCTGAGATCC-AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 || ||| ||||| | | ||| ||||||||||||||| ||||| || ||||| |||| Sbjct 7039241 TTGGTCCTCGATCCAATGCAAG-GCCCAGTCTGCCTTCCTCTTGGCACAAGGCATGGTCT 7039299 Query 48360 CTATGGC 48366 | |||| Sbjct 7039300 CAGTGGC 7039306 >seq7 Length=35612534 Score = 107 bits (118), Expect = 4e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | ||| |||||| |||||||||| ||| || ||||| | || | || ||| Sbjct 33433148 TCATCTCTGCTAATGAGCTCGTTGGAGAACGTGAGGCCCGGCATCAGGCCTCGCTTCTTG 33433207 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || | |||||| ||||| |||||||||||||||||||| || |||||||| Sbjct 33433208 AGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAACGC 33433266 >seq10 Length=32971688 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 9656458 TTCACTTTTTCCTCCAGCCGGGCGATTCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 9656517 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 9656518 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 9656577 Query 241619 ATCGGAGA 241626 || || || Sbjct 9656578 ATGGGGGA 9656585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931453747797760