Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 2e-15 seq175 93.3 8e-14 seq12 87.8 3e-12 >seq19 Length=23049436 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || | ||||| |||| ||| || ||||||||||| |||||||| || Sbjct 10825160 ATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 10825219 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| || ||||| || | ||||| || ||||| || Sbjct 10825220 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 10825279 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || ||||| | || || ||||| || Sbjct 10825280 GGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq175 Length=2568445 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || ||||| || || || | ||| || | ||| || || ||||| || | | | Sbjct 778837 AATGTTGTAGTCAGACAAAGTACACCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTT 778778 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || ||||||||||| |||||||| ||||| || || |||| |||| |||| || || Sbjct 778777 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGT 778718 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| | | ||||| | ||||| || || || || || || ||||| ||||| || || Sbjct 778717 ATCCAAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTG 778658 Query 193358 CATTTT 193363 || || Sbjct 778657 TATCTT 778652 >seq12 Length=31948864 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/159 (72%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||||| || || ||||| || ||| || ||||||||||| |||||||| || Sbjct 15540767 ATCTTCCAATTGCTTCCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 15540826 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| || ||||| |||| ||||| | |||| | Sbjct 15540827 ATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAAGGATCAACCTTGAGAG---T 15540883 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || ||||| || || || | ||| || Sbjct 15540884 GGTCTTCCCCGTGAGGGTTTTCACGAAAATCTACATCTT 15540922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899578053078480