Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq19 111 3e-19 seq175 96.9 7e-15 seq14 89.7 1e-12 seq7 86.0 1e-11 >seq19 Length=23049436 Score = 111 bits (122), Expect = 3e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420 || ||||| || || || |||| |||| ||| || |||||||||||| ||| || ||| Sbjct 10825140 TAGTCAGACAAAGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGA 10825199 Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480 ||||| || |||||||| ||||| || || || |||||||| ||| | ||| || Sbjct 10825200 TCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAG 10825259 Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | ||| || || ||||| ||||| || || || | ||||| | || |||||||| || Sbjct 10825260 GGTTCAACCTCGAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq175 Length=2568445 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| || || | |||| |||| ||| || |||||||||| Sbjct 778843 CTTTTGA-ATGTTGTAGTCAGACAAAGTACACCCATCTTCCAGTTGCTTGCCAGCAAAGA 778785 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | | | || |||||||| || |||||||| ||||| || || || |||||||| Sbjct 778784 TCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTT 778725 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 ||| | ||| | | ||| || | ||||| ||||| || || || | ||||| | || Sbjct 778724 CTATCGTATCCAAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAA 778665 Query 192527 ATATCTGCATTTT 192539 | ||||| || || Sbjct 778664 AAATCTGTATCTT 778652 >seq14 Length=29593583 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || ||||| || || ||| |||| |||| || || ||||||||||| | ||| Sbjct 4554791 ATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGTCTT 4554850 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || || || |||||||| ||||| || || || |||||||| ||| | | Sbjct 4554851 TGCTGGTCCGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTA 4554910 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 || || | ||| || || ||||| ||||| || Sbjct 4554911 TCCGAGGGTTCAACCTCCAGAGTGATGGTCTT 4554942 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 192305 TAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAA 192363 ||| |||||| ||| | || || | ||| | ||| | ||| ||| || || || || Sbjct 11200218 TAACACCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAG 11200276 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||||| || || | ||| |||| ||| || ||||||||||| | ||| || |||||| Sbjct 11200277 TCAGACAAAGTATGCCCATTTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCA 11200336 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || |||||||| ||||| || || || |||||||| ||| ||| || | | Sbjct 11200337 GGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGT 11200396 Query 192484 TCTACTTCTAGAGTAATG 192501 || || || ||||| ||| Sbjct 11200397 TCAACCTC-AGAGTGATG 11200413 >seq7 Length=35612534 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/206 (70%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||| | ||| ||| || || || || |||| Sbjct 30012088 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 30012146 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || || || |||||||| || |||| |||||| | ||| || |||||||| | Sbjct 30012147 ACAAAGTATGTCTATTTTCCAATTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAG 30012206 Query 192428 GTATTCCTTCTTTATCTTGTAT-TTTATTTTT-----TACATTAGTTATAGAATCTGACG 192481 | ||||||||||||| | || || | |||| || ||| ||| | ||| || | Sbjct 30012207 GAGTTCCTTCTTTATCCTAGATCTTGACTTTTACTAGTATATTTTCTATCGCATCCGAGG 30012266 Query 192482 ATTCTACTTCTAGAGTAATGGTTTTA 192507 ||| || || ||||| | ||||||| Sbjct 30012267 GTTCAACCTCAAGAGTGAGGGTTTTA 30012292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984394365930150