Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 8e-14 >seq4 Length=40935223 Score = 93.3 bits (102), Expect = 8e-14 Identities = 134/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 171880 CTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAA 171939 |||||||| | || || || || |||| || | || |||| ||| || |||||||||| Sbjct 21336406 CTTTAGAA-TGTTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAAA 21336464 Query 171940 TTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 171999 | | ||| || || ||| || |||||||| ||| | || || || || | ||| Sbjct 21336465 TCAGTCTTTGCTGAAGAGGAGGAATTCCTTCCTTAACCTGGATCTTGGCCTTCATATTTT 21336524 Query 172000 TTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGA 172059 || |||||||| | ||| || || ||||| ||||| || || || | ||||| |||| Sbjct 21336525 CTACTGTATCTGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTCATGA 21336584 Query 172060 ATATCTGC 172067 | |||||| Sbjct 21336585 AAATCTGC 21336592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905059187896200