Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq41 167 3e-35 seq125 152 6e-31 seq351 107 2e-17 seq7 100 3e-15 >seq41 Length=12856485 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 75139 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 75198 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 75199 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 75258 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 75259 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 75318 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 75319 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 75355 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 107171 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 107112 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 107111 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGA 107052 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 107051 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 106992 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 106991 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 106955 Score = 161 bits (178), Expect = 1e-33 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 156699 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGATGTGA 156640 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 156639 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 156580 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 156579 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 156520 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||| ||||||||||||||||| | | || |||||| Sbjct 156519 GCACTTGCTTGAGCACCTTGTACACGTACACCGAGTA 156483 Score = 149 bits (164), Expect = 8e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | |||||||||||| |||||||||||||| | | | Sbjct 375108 GCTTGGCCAACTCGCCGGGCAGTAGCAGGCGCACGGCCGTCTGGATCTCGCGAGAGGTTA 375049 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | || ||||| || |||||| ||||||| |||| | Sbjct 375048 TGGTCGAGCGTTTGTTGTAATGTGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCGAAAA 374989 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || ||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 374988 TATCATTGACGAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCAGTGTCAGGGT 374929 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||||||| | |||||| Sbjct 374928 GCACCTGCTTGAGCACCTTGTAGATGTAAATCGAGTA 374892 Score = 149 bits (164), Expect = 8e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | ||||||||| || |||||||||||||| | | | Sbjct 375490 GCTTGGCCAACTCGCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCGCGAGAGGTTA 375549 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| | || || || | | Sbjct 375550 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCAGCAGAGAGACGCTCAAAAA 375609 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||||||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 375610 TGTCATTGACAAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCAGTGTCAGGGT 375669 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||||||| | |||||| Sbjct 375670 GCACCTGCTTGAGCACCTTGTAGATGTAAATCGAGTA 375706 >seq125 Length=3709634 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 2668444 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 2668503 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 2668504 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCCCCCGCGATGCGCTCGAAGA 2668563 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 2668564 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 2668623 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2668624 GTACCTGCTTGAGCACCTTGTA 2668645 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||||||| || ||||||||||| || | | || Sbjct 2621938 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGAGGTGA 2621997 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||||| | ||||||| |||| | Sbjct 2621998 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 2622057 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 2622058 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2622117 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || || || ||||| ||||| Sbjct 2622118 GAACTTGTTTCAGCACTTTGTA 2622139 >seq351 Length=425020 Score = 107 bits (118), Expect = 2e-17 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 215010 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 214951 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 214950 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 214891 Query 1254463 TGTCGTTGACAAACGAGTTCAT 1254484 |||||||||| || |||||||| Sbjct 214890 TGTCGTTGACGAAGGAGTTCAT 214869 Score = 102 bits (112), Expect = 1e-15 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 239576 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 239517 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 239516 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 239457 Query 1254463 TGTCGTTGACAAACGAGTT 1254481 |||||||||| || ||||| Sbjct 239456 TGTCGTTGACGAAGGAGTT 239438 >seq7 Length=35612534 Score = 100 bits (110), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 869831 ACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGG 869890 ||||||||||| ||||||| |||||||||||||| |||||||||| ||| | | |||| Sbjct 33436632 ACCTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCCTGG 33436691 Query 869891 TAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 || ||| ||||||| || |||||| |||||| || |||| ||| || || Sbjct 33436692 TACTCGATGGGGAAGACCACGAAGCGGCGGGGGTTCTCCCGCAGCAGCGGCTC 33436744 Score = 91.5 bits (100), Expect = 2e-12 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCA 869259 |||||| || | |||||| ||||| ||||| |||||||||||||| ||||||| ||| Sbjct 33433166 TCGTTGGAGAACGTGAGGCCCGGCATCAGGCCTCGCTTCTTGAGCCAGAAGATGGACGC- 33433224 Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||| ||||| ||||||||||| |||||||| || Sbjct 33433225 GAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAA 33433263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106582062867113