Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq19 114 1e-20 seq228 109 5e-19 seq175 109 5e-19 seq65 105 6e-18 seq127 100 3e-16 seq15 93.3 4e-14 seq126 89.7 5e-13 seq57 89.7 5e-13 seq14 89.7 5e-13 seq54 84.2 2e-11 >seq19 Length=23049436 Score = 114 bits (126), Expect = 1e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||||| || ||| || | Sbjct 10825316 GATGCAGATTTTCTTGAAAACTCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 10825257 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 10825256 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 10825197 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | | |||||||| | || || ||||| ||| || | || | ||| || || | Sbjct 10825196 GCAAAGACTAATCTTTGCTGTCAAGCAACTGGAAGATG-GACACACTTTGTCTGACTACA 10825138 Query 24882 ACATTCAAAAGGAATCGACACT 24903 |||||||||||| || || || Sbjct 10825137 GCATTCAAAAGGAGTCCACTCT 10825116 >seq228 Length=1351672 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || ||||| || || || || || ||| Sbjct 29382 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGCCCAGT 29323 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || ||||||||||| || || || | | || || Sbjct 29322 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGTCTGACCAG 29263 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||| | |||||||| |||||| | | | ||||| || ||| Sbjct 29262 CAGCGTCTGATTTTTGCCAGCAAACAGCTTGAGGATGGTCGCACTCTCTCAGACTACAAC 29203 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || ||||| || || ||||||||| Sbjct 29202 ATTCAGAAAGAATCCACCCTGCACTTGGTG 29173 >seq175 Length=2568445 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||| ||||| ||| | ||||| || || || || || || || ||| | || ||| || Sbjct 778654 GATACAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCAAGGTTGAACCCTT 778713 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 778714 GGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 778773 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| |||||||||| || || || ||||| ||| | | | |||| || || || Sbjct 778774 GCAAAAACTGATCTTTGCTGGCAAGCAACTGGAAGATGGGTGTACTTTGTCTGACTACAA 778833 Query 24883 CATTCAAAAGGAATC 24897 |||||||||||| || Sbjct 778834 CATTCAAAAGGAGTC 778848 >seq65 Length=8612916 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || ||| ||| Sbjct 6272440 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAG 6272499 Query 24763 CGACACAGTAGAAACGGT-AAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| || | || ||||| ||| ||||||||| || || || || || || | Sbjct 6272500 TGACACCACTGAGAGTGTCAAAACTAAA-ATCCAAGACCGGGAGGGCATCCCGCCTGACC 6272558 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || || |||| |||||||| ||||||||||||||| | | | ||||| || | Sbjct 6272559 AGCAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACA 6272618 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | ||||| || || || || || ||||||||| || |||| || ||| Sbjct 6272619 ATATTCAGAAAGAGTCCACCCTGCACTTGGTGCCCCGTCTGCGTGGGGGC 6272668 >seq127 Length=3912380 Score = 100 bits (110), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || || || || || || || ||| | || | | || Sbjct 1384221 GATGCAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCAAGGTTGGACCCTT 1384162 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| || ||| ||||| ||||||| || || |||||||| ||||| ||||| Sbjct 1384161 GGATACAATAAAAAATGTAAAGGCCAAGATCCGGGATAAGGAAGGAATTCCTCCTGATCA 1384102 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881 ||| | |||||||| | | || || ||||| || || | || |||| || || | Sbjct 1384101 GCAAAGACTGATCTTT-CTGTCAAGCAACTGGAAGACA-GACATACTCTGTCTGACTACA 1384044 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| || || || || | |||||| || | || || || Sbjct 1384043 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1383995 >seq15 Length=28312309 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/218 (71%), Gaps = 7/218 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | |||| ||||| ||||| || || || |||| || ||| || Sbjct 28058347 ATGCAGATTTTTGTGAAAATCCTAACGGGTAAGACCATCACTTTCGAGGTTGAACCCTTG 28058406 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| ||||| |||| | || || | | || | |||||||| ||||| | ||| Sbjct 28058407 GATACAACAGAAAATGTAAGGCCAA-GAACTAGGATGAGGAAGGAATTCCTCCTGGTCAG 28058465 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCT----GGAGGATTCGAGAAACAT-GTCAGATT 24878 ||| | |||||||||| || || || || ||| ||| || ||| ||| || | Sbjct 28058466 CAAAGACTGATCTTTGCTGGCAAGCAACTAACTGGAAGATG-GATGTTCATTGTCTGACT 28058524 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 | ||||||||||| ||||| || || ||| | |||||| Sbjct 28058525 ACAACATTCAAAAAGAATCCACTCTTCACCTTGTGTTG 28058562 >seq126 Length=3816233 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||||||| | || || | || |||| || || || ||| | || || ||| |||| Sbjct 216043 AGATCTTTGTGAAGACTTTGACTAGTAAGACCATCACCCTCAAGGTTGAGCCCAGTGACA 216102 Query 24768 CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAAC 24827 | | | | || || ||||| |||||||||||||| || || || || || | Sbjct 216103 CCATCAAGAATGTCAAGGTCAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAGAAGA 216162 Query 24828 GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTC 24887 | ||||||||||||| ||||| ||||| ||| | | | |||| || || ||||||| Sbjct 216163 GGCTGATCTTTGCCGGTAAACAACTGGAAGAT--GGGCTCCCTGTCCGACTACAACATTC 216220 Query 24888 AAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || || || || || ||| |||| |||| || | ||||| Sbjct 216221 AGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTAAGAGGAGG 216263 >seq57 Length=10025392 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||||||||| || | ||| |||| |||| ||| |||||| |||| |||| |||| Sbjct 65920 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 65979 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611 || || || ||||||||||||||||| |||| || || ||||| Sbjct 65980 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCAT 66023 >seq14 Length=29593583 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24771 TAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTT 24830 |||||| ||||| |||||||| || || |||||||| ||||| ||||| ||| | Sbjct 11200382 TAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGAC 11200323 Query 24831 TGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAA 24890 |||||||||| || || || ||||| || | | |||| || || |||||||||| Sbjct 11200322 TGATCTTTGCTGGCAAGCAACTGGAAAATGGGCATACTTTGTCTGACTACAACATTCAAA 11200263 Query 24891 AGGAATCGACACTACACTTGGTGTTGCGA 24919 |||| || || || || | |||||| || Sbjct 11200262 AGGAGTCCACTCTTCATCTTGTGTTGAGA 11200234 >seq54 Length=10138281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||| || || || || || || || ||||| || ||| || | Sbjct 8825088 GATGCAGATTTTCATGAAAACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAACCCTC 8825147 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| ||| |||| | || ||||| | | | ||||| Sbjct 8825148 GGATACAATAGAATATGTAAAGGCCAAGTTCCAGGGTAA----GGAATTCTTACTGATCA 8825203 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 8825204 GCAAAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGTTGTACTTTGTCTGACTACAA 8825263 Query 24883 CATTCAAAA 24891 ||||||||| Sbjct 8825264 CATTCAAAA 8825272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449859420564920