Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq112 86.0 6e-12 seq59 82.4 7e-11 >seq112 Length=4089087 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| ||||| || || ||||||||||| ||||||| ||||| |||||| Sbjct 2156926 TCCTCTGGAAGGTCCCGTCCAGCGCAGCCACGATGACCGTCTTCCCGGCGTTGGCCATGG 2156867 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 ||||| ||||||||| | ||| Sbjct 2156866 TCTCGCTGAACTCCACGATGTC 2156845 >seq59 Length=9805431 Score = 82.4 bits (90), Expect = 7e-11 Identities = 185/273 (68%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 90043 ACGGTACCGAAGCCCTCGGCCAGGTCGAAGCGCACCTTCCCGCACCCGGCCTCCCAGGCG 90102 ||||| | || |||||||| | ||||| || | |||||| |||||||||| Sbjct 2473865 ACGGTCCGAAATCCCTCGGCGGTGCTGAAGCAGGTCTCCTTGCACCCACGCTCCCAGGCG 2473806 Query 90103 TAGACCGCCAGCAGGTCCAGGACGGCGGGGTCCGGCAGCTGGTCCCCGATCTTCTCCTGG 90162 ||||| | |||||| |||||| || | | ||||||| | | ||| | || ||||| | Sbjct 2473805 TAGACGGTCAGCAGCTCCAGGGCGTACTGCTGCGGCAGCGGCTTCCCCAGCTGCTCCTTG 2473746 Query 90163 CAGAGCGAGAACCAGTACCGCAGCAGCGCCACCAGCCACTTGAGCTTGACGGGCCGGTCC 90222 | ||| | |||||| | | ||| | || | |||||||||| |||||| | | Sbjct 2473745 CTCAGCTGGTACCAGTGCTTGACCAGGCGGATGAGGCTCTTGAGCTTGGTGGGCCGCTGC 2473686 Query 90223 CGGAAGAAGTGCTGGC-GGAGGTAGGCGAAGCAGTGGCG-GAAGGCGCCGGGCGTCTTCT 90280 || | |||| ||| || | || | | ||||||| |||| ||| |||| | || | Sbjct 2473685 CGCAGGAAG-GCTCGCTGCAGCTCCGTGAAGCAG-GGCGAGAACTCGCCCTCCTTCCCCA 2473628 Query 90281 CGCGCTCGCACTCGGAGATCAGCCGGACGTAGA 90313 ||| ||||||| ||| ||| |||||||| Sbjct 2473627 GGCGTGTGCACTCGTTGATGAGCTTGACGTAGA 2473595 Score = 82.4 bits (90), Expect = 7e-11 Identities = 185/273 (68%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 90043 ACGGTACCGAAGCCCTCGGCCAGGTCGAAGCGCACCTTCCCGCACCCGGCCTCCCAGGCG 90102 ||||| | || |||||||| | ||||| || | |||||| |||||||||| Sbjct 2485030 ACGGTCCGAAATCCCTCGGCGGTGCTGAAGCAGGTCTCCTTGCACCCACGCTCCCAGGCG 2485089 Query 90103 TAGACCGCCAGCAGGTCCAGGACGGCGGGGTCCGGCAGCTGGTCCCCGATCTTCTCCTGG 90162 ||||| | |||||| |||||| || | | ||||||| | | ||| | || ||||| | Sbjct 2485090 TAGACGGTCAGCAGCTCCAGGGCGTACTGCTGCGGCAGCGGCTTCCCCAGCTGCTCCTTG 2485149 Query 90163 CAGAGCGAGAACCAGTACCGCAGCAGCGCCACCAGCCACTTGAGCTTGACGGGCCGGTCC 90222 | ||| | |||||| | | ||| | || | |||||||||| |||||| | | Sbjct 2485150 CTCAGCTGGTACCAGTGCTTGACCAGGCGGATGAGGCTCTTGAGCTTGGTGGGCCGCTGC 2485209 Query 90223 CGGAAGAAGTGCTGGC-GGAGGTAGGCGAAGCAGTGGCG-GAAGGCGCCGGGCGTCTTCT 90280 || | |||| ||| || | || | | ||||||| |||| ||| |||| | || | Sbjct 2485210 CGCAGGAAG-GCTCGCTGCAGCTCCGTGAAGCAG-GGCGAGAACTCGCCCTCCTTCCCCA 2485267 Query 90281 CGCGCTCGCACTCGGAGATCAGCCGGACGTAGA 90313 ||| ||||||| ||| ||| |||||||| Sbjct 2485268 GGCGTGTGCACTCGTTGATGAGCTTGACGTAGA 2485300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476001201919720