Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq228 123 2e-23 seq65 120 2e-22 seq126 109 4e-19 seq186 105 4e-18 seq175 89.7 3e-13 seq68 87.8 1e-12 seq40 87.8 1e-12 seq4 82.4 5e-11 >seq228 Length=1351672 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| || ||||||||||| ||||| || || |||| |||| Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || | ||| || ||||| || |||||||| | | | ||||||||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCT 29290 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| ||| || |||| ||| || | Sbjct 29291 TGGATTTTAGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAG 29348 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| |||||||||||||| Sbjct 29349 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq65 Length=8612916 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | |||| ||| |||||||| || ||||| || || |||| |||| ||| Sbjct 6272649 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTCC 6272590 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || ||||| || ||||| || |||||||| |||| | |||||| ||| | Sbjct 6272589 AGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGG 6272530 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| |||||| | | | ||| ||| ||||| || | ||| |||||||| Sbjct 6272529 ATTTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTG 6272470 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| || ||||||||||| Sbjct 6272469 CCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq126 Length=3816233 Score = 109 bits (120), Expect = 4e-19 Identities = 161/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || || | |||||||||||| | ||| ||| ||||||||||| ||||| || Sbjct 216263 CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAC 216204 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || |||| |||||||| || ||||| |||||||| | | |||||| | || Sbjct 216203 AGG--GAGCCCATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGGG 216146 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || ||||| | || || ||||| || || || | ||| ||| ||| | Sbjct 216145 ATGCCTTCTTTGTCTTGAATCTTGACCTTGAC--ATTCTTGATGGTGTCACTGGGCTCAA 216088 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCT 34973 | | | ||| |||||||| | || | ||||| |||||||||| Sbjct 216087 CCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 >seq186 Length=2028101 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||| ||||| ||||| ||||| || || | || |||| Sbjct 786265 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCT 786206 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||| || | |||||||| | || | || ||||| || Sbjct 786205 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 786146 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||| || || || || | ||| ||| ||| | || | ||| |||| Sbjct 786145 TGGATCTTGGCTTTCAC--ATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGG 786088 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||| ||||| Sbjct 786087 TCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 786054 >seq175 Length=2568445 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| || | | | | |||| ||||||||||| || || || Sbjct 778846 CTCCTTTTGAATGTTGTAGTCAGACAAAGTACACCCATCTTCCAGTTGCTTGCCAGCAAA 778787 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| |||||| || | || | || ||||| || | || || || || Sbjct 778786 GATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATT 778727 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||||| || || || || | | || |||||||| ||||||||||| || || Sbjct 778726 TTCTATCGTATCCAAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCAC 778667 Query 34966 AAAGATCTGCAT 34977 ||| ||||| || Sbjct 778666 AAAAATCTGTAT 778655 >seq68 Length=7962601 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||| || | | | || || |||| |||| || || || || || | || Sbjct 2654576 CTCTTTCTGAATATTGTGGCCTGAGAGAGTGCGGCCATCCTCTAGCTGTTTGCCCGAAAA 2654517 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | | |||||| |||| | ||||||||||| | ||||| ||||| | Sbjct 2654516 AATCAGATGGTACTGGTCAGGCGGGATGCCCTCCTTGTCTTAGATTTTAGCATTGAC--A 2654459 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | ||| | ||| || |||| ||| |||||||| || || |||||||| Sbjct 2654458 TTCTCAATGGTATCACTAAGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 2654399 Query 34964 ACAAAGATCTGCAT 34977 |||||||| ||||| Sbjct 2654398 ACAAAGATATGCAT 2654385 >seq40 Length=13002427 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/208 (71%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||| | |||| ||| | |||||| || ||||| || | |||| |||| |||| Sbjct 3990695 CCAAGTGCAGGGTGGACTCTTGCTGAATATTGTAGTCTGAATG--TGCGTCCATCCTCCA 3990752 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || | || | ||| || |||||||| || | | |||||| |||| | | Sbjct 3990753 GCTGCTTGCCCACAAAAACCAGACGCTGCTGGTCAGGCAGGATGCCCTCCCTGTCTTGGA 3990812 Query 34890 TTTTTTGTTTGACGGATGCTA-TCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 |||| |||| | || || | || ||| ||| ||| || || | || ||| |||| Sbjct 3990813 TTTTAGCTTTGGCAT-TGTTAGTGGAGTCACTGGTCTCAACCTCCAAGGCCATGATCTTG 3990871 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || || ||| |||||||||||| ||||| Sbjct 3990872 CCAGTCAGG-TCTTTACAAAGAGCTGCA 3990898 >seq4 Length=40935223 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | |||| ||| ||||| |||| ||||| Sbjct 7265299 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTCGTAGTC---- 7265354 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || || | |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 7265355 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 7265414 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || ||||| || | || || || || || || || | ||| || ||| Sbjct 7265415 ATGCCTTCCTTATCTTGGATCTTGGCCTTCAC--ATTCTCAATGGTATCACTGTGCTCAG 7265472 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| || || |||||||| || ||||| ||||| Sbjct 7265473 CCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 7265521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325665851872391