Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq186 86.0 5e-12 >seq186 Length=2028101 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/222 (69%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602 ||| |||| ||||||||||| || || || || | || ||||| ||||| ||| | || Sbjct 786042 TAACAGGTC-AAAATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGA 786100 Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662 | |||| | | ||||| | | | || ||| ||||| ||||| |||||| | Sbjct 786101 GATGGAGCCCAGTGATACCATTGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGCAT 786160 Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722 || || |||||||| || || | ||| || || |||||||| || | | || | Sbjct 786161 CCCTCCTGACCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACTCT 786220 Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 | ||||||||||| || || ||||| || ||||| |||| Sbjct 786221 TTCTGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGT 786262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398843796559621