Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq228 134 1e-26 seq175 102 6e-17 seq19 95.1 9e-15 seq15 89.7 4e-13 seq126 86.0 5e-12 seq127 84.2 2e-11 seq54 82.4 6e-11 seq14 82.4 6e-11 >seq228 Length=1351672 Score = 134 bits (148), Expect = 1e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||||||||||| |||||||| || || | | |||||| ||| Sbjct 29171 AGCACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCC 29230 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||| ||| | |||| | ||||| || | | | || ||||| |||||| Sbjct 29231 TCAAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCT 29290 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||||||| | || | |||||| | || || ||||| || ||||| Sbjct 29291 TGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTC 29350 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 |||||||| | ||| || ||||| |||||||||| Sbjct 29351 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 29384 >seq175 Length=2568445 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | ||||||| ||| || ||||||||||| || || | | || | ||| Sbjct 778867 CAACACAAGATGAAGCAGGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACACCCATC 778808 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| | |||||||||| || ||||| || || || || Sbjct 778807 TTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 778748 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || | |||| || | ||||| || || Sbjct 778747 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTTGAGAGTGATGGT 778688 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| ||||| ||||| || || Sbjct 778687 CTTCCCCGTGAGGGTTTTCACAAAAATCTGTATCTT 778652 >seq19 Length=23049436 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 29585 GAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTT 29644 |||| ||||| || ||||||||| | || || | | ||| | ||| || ||||| | Sbjct 10825114 GAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTGTGTCCATCTTCCAGTTGCT 10825173 Query 29645 TGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTT 29704 || ||||| | || | |||||||||||| || ||||| || || || || || | || Sbjct 10825174 TGACAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGG 10825233 Query 29705 GTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTA 29764 || ||| |||||| || || || |||| || || ||||| || || || || || | Sbjct 10825234 CCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTGA 10825293 Query 29765 AGGTTTTAACAAATATCTGCATTTT 29789 ||||| | || |||||||| || Sbjct 10825294 GAGTTTTCAAGAAAATCTGCATCTT 10825318 >seq15 Length=28312309 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/212 (71%), Gaps = 9/212 (4%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATC----GA 29638 ||||| |||||||||||||||||||| || || | |||| | | ||| || | Sbjct 28058552 TGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAT-GAACATCCATCTTCCAGTTA 28058494 Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT-CTTGT 29697 |||| ||||||||| | |||| |||||||||| | || ||||| || || | | || || Sbjct 28058493 GTTGCTTGCCAGCAAAGATCAGTCTTTGCTGACCAGGAGGAATTCCTTCCTCATCCTAGT 28058434 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || | | ||| ||||| || || | |||| || || | ||| || || || Sbjct 28058433 --TCTTGGCCTTACATTTTCTGTTGTATCCAAGGGTTCAACCTCGAAAGTGATGGTCTTA 28058376 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || |||| | |||| ||||| |||||||| || Sbjct 28058375 CCCGTTAGGATTTTCACAAAAATCTGCATATT 28058344 >seq126 Length=3816233 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || || ||||| |||| || || ||||| ||||| |||||||| || || | Sbjct 216263 CCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGGAC 216204 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || |||||||| || ||| | |||| || | ||| || || || Sbjct 216203 AGGGAGCCC--ATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGGGG 216146 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | || |||||| | | | |||||| | || || Sbjct 216145 ATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAACC 216086 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA----TATCTGCATT 29787 | || || || || || | ||| || || || ||||| |||||||||| Sbjct 216085 TTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCTATCTGCATT 216034 >seq127 Length=3912380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | || | || Sbjct 1384009 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTATGTCTGTC 1384068 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||| ||| | | |||| |||||||||||| || ||||| || || || || Sbjct 1384069 TTCCAGTTGCTTGACAGAA-AGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1384127 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 | | || || ||| ||| || || || | || | || | ||||| || || Sbjct 1384128 CCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGTCCAACCTTGAGAGTGATGGT 1384187 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| ||||| |||||||| || Sbjct 1384188 CTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 1384223 >seq54 Length=10138281 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||| | |||| | |||||||||||| || || | | || | | ||| Sbjct 8825297 CAACACAAGATGAGGAGTGGTCTTTTTTTGAATGTTGTAGTCAGACAAAGTACAACCATC 8825238 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||||||||||| | |||| || || | Sbjct 8825237 TTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGTAAGAAT----TCCTTACC 8825182 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || || || || ||| ||||| || || || |||| || || ||||| || || Sbjct 8825181 CTGGAACTTGGCCTTTACATATTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 8825122 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| | || |||||||| || Sbjct 8825121 CTTCCCTGTAAGGGTTTTCATGAAAATCTGCATCTT 8825086 >seq14 Length=29593583 Score = 82.4 bits (90), Expect = 6e-11 Identities = 125/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | || | || Sbjct 11200237 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGCCCATT 11200296 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 11200297 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 11200356 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || | || || ||| |||||| | || || |||| || || ||||| || Sbjct 11200357 CTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAACCTC-AGAGTGAT 11200412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385187326602249