Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08]
6,789 sequences; 2,026,629,342 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq136 120 3e-22
seq98 109 5e-19
>seq136
Length=3622272
Score = 120 bits (132), Expect = 3e-22
Identities = 428/658 (65%), Gaps = 16/658 (2%)
Strand=Plus/Plus
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| |||||| || | ||||||||||||||||| ||| ||||| |||||
Sbjct 1032990 AAGACCCTGGCTGCCATTGGGATGGGCTTTGACTGTGCCAGCAAGACTGAGATACAGTTG 1033049
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
|||| | || || || | | || ||||| | | ||| || |||||||| ||
Sbjct 1033050 GTGCAGAGCCTCGGGGTGCCTCCGGAGAGGATCATCTATGCAAACCCTTGTAAACAAGTG 1033109
Query 20444 TCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501
|| || || | || ||||| || ||| ||||| | |||||||||| ||||| ||||
Sbjct 1033110 TCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGAAG 1033167
Query 20502 AAGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAG 20561
||||| | || ||| | || | | || ||| |||| || |||||
Sbjct 1033168 TCGAGCTGATGAAGGTTGCCAGGGCACATCCAAAGGCAAAGATGGTTTTGCGGATTGCCA 1033227
Query 20562 TGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAG-CC 20620
|||||||| || ||| | || ||||| || ||||| || | | | ||| ||
Sbjct 1033228 CCGATGACTCCAAAGCAGTGTGTCGTCTCAGTGTTAAATTTGGTGC-CACACTCAAGACC 1033286
Query 20621 AGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTC 20680
||| | || | ||| |||||| | || | | || || ||||| || ||||||
Sbjct 1033287 AGCAGGCTTCTTTTGGAACGGGCCAAGGAGCTAAACATCGATGTCATCGGTGTGAGCTTC 1033346
Query 20681 CACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGG 20740
||||||||||||||||| | || | || | | | ||||| | || ||| |
Sbjct 1033347 CACGTGGGCAGTGGCTGTACTGACCCTGAGACCTTTGTGCAGGCCATCTCCGATGCCTGC 1033406
Query 20741 AGAGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTG 20798
| | || ||| | || ||||| | ||||| |||||||||| | ||||| ||||
Sbjct 1033407 TGTGTCTTCGACATGGG--GGCTGAGGTTGGCTTCAACATGTACCTGATAGATATAGGTG 1033464
Query 20799 GCGGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCA 20855
| |||||| || | ||| |||| || ||| | |||||||| || | || |
Sbjct 1033465 GTGGCTTT-CCTGTATC--TGAGGATGCAAAGCTTAAATTTGAGGAGATCACCAGTGTAA 1033521
Query 20856 TTAACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAAC 20915
| ||| | ||| |||| | | |||||||| || | ||||| | || ||| |
Sbjct 1033522 TCAACCCAGCCCTGGACAAGTATTTTCCATGAGACTCGGGAGTGACACTCATAACTGAGC 1033581
Query 20916 CTGGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA 20973
| ||||| ||||| | | | || || | || | || || | | | ||||| |||||
Sbjct 1033582 CGGGCAGATACTATGTTGCGTCAGCTTTCACGCTTGCAGTTAATATCATTGCCAAAAA 1033639
>seq98
Length=4963462
Score = 109 bits (120), Expect = 5e-19
Identities = 213/309 (69%), Gaps = 12/309 (4%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| | || || ||||| ||| ||| |||| | |||||||| || |
Sbjct 4126406 ATGCCTTCTATGTTGTGGACCTGGGAGACATTCAAAAGAAACATCTGAGATGGCTAAAAG 4126465
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323
|| | ||| |||||| || || | || || || | || ||| ||||| | |
Sbjct 4126466 CTCTTCCTCAAGTCACCCCGTTAT--GCAGTCAAATGC---AATGACAAGAGAACCATAG 4126520
Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381
||||| ||||||||| | || || |||||||||||||| ||| ||||| ||||
Sbjct 4126521 TGAAGACTCTAGCTGCCATCTGGACGGGATTTGACTGTGCCAGAAAGACTGAGATACAGT 4126580
Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441
| |||| | ||| || || |||||||||| | | ||| || |||||||| ||
Sbjct 4126581 TGGTGCAGAGTCTTGGGGTGTCTTCAGACAGGATCATCTATGCAAACCCTTGTAAACAAG 4126640
Query 20442 CTTCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499
|| || || | || ||||| || ||| ||||| | |||||||||| ||||| ||
Sbjct 4126641 TGTCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGA 4126698
Query 20500 AGAAGAGCT 20508
|| |||||
Sbjct 4126699 AGTCGAGCT 4126707
Score = 100 bits (110), Expect = 3e-16
Identities = 211/309 (68%), Gaps = 12/309 (4%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| | || || ||||| ||| ||| |||| | |||||||| || |
Sbjct 994549 ATGCCTTCTATGTTGTGGACCTGGGAGACATTCAAAAGAAACATCTGAGATGGCTAAAAG 994608
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323
|| | ||| | |||| ||||| | || | || | || ||| ||||| | |
Sbjct 994609 CTCTTCCTCAGGTCACCCCATTAT--GCAGACAAATGC---AATGACAAGAGAACCATAG 994663
Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381
||||| ||||||||| | | || |||||||||||||| ||| ||||| ||||
Sbjct 994664 TGAAGACTCTAGCTGCCATCTGGATGGGATTTGACTGTGCCAGAAAGACTGAGATACAGT 994723
Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441
| |||| | ||| || || |||||||||| | | ||| || |||||||| ||
Sbjct 994724 TGGTGCAGAGTCTTGGGGTGTCTTCAGACAGGATCATCTATGCAAACCCTTGTAAACAAG 994783
Query 20442 CTTCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499
|| || || | || ||||| || ||| ||||| | |||||||||| ||||| ||
Sbjct 994784 TGTCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGA 994841
Query 20500 AGAAGAGCT 20508
|| |||||
Sbjct 994842 AGTCGAGCT 994850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463506262361520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |