Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq136 120 3e-22 seq98 109 5e-19 >seq136 Length=3622272 Score = 120 bits (132), Expect = 3e-22 Identities = 428/658 (65%), Gaps = 16/658 (2%) Strand=Plus/Plus Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383 |||||||| |||||| || | ||||||||||||||||| ||| ||||| ||||| Sbjct 1032990 AAGACCCTGGCTGCCATTGGGATGGGCTTTGACTGTGCCAGCAAGACTGAGATACAGTTG 1033049 Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443 |||| | || || || | | || ||||| | | ||| || |||||||| || Sbjct 1033050 GTGCAGAGCCTCGGGGTGCCTCCGGAGAGGATCATCTATGCAAACCCTTGTAAACAAGTG 1033109 Query 20444 TCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501 || || || | || ||||| || ||| ||||| | |||||||||| ||||| |||| Sbjct 1033110 TCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGAAG 1033167 Query 20502 AAGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAG 20561 ||||| | || ||| | || | | || ||| |||| || ||||| Sbjct 1033168 TCGAGCTGATGAAGGTTGCCAGGGCACATCCAAAGGCAAAGATGGTTTTGCGGATTGCCA 1033227 Query 20562 TGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAG-CC 20620 |||||||| || ||| | || ||||| || ||||| || | | | ||| || Sbjct 1033228 CCGATGACTCCAAAGCAGTGTGTCGTCTCAGTGTTAAATTTGGTGC-CACACTCAAGACC 1033286 Query 20621 AGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTC 20680 ||| | || | ||| |||||| | || | | || || ||||| || |||||| Sbjct 1033287 AGCAGGCTTCTTTTGGAACGGGCCAAGGAGCTAAACATCGATGTCATCGGTGTGAGCTTC 1033346 Query 20681 CACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGG 20740 ||||||||||||||||| | || | || | | | ||||| | || ||| | Sbjct 1033347 CACGTGGGCAGTGGCTGTACTGACCCTGAGACCTTTGTGCAGGCCATCTCCGATGCCTGC 1033406 Query 20741 AGAGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTG 20798 | | || ||| | || ||||| | ||||| |||||||||| | ||||| |||| Sbjct 1033407 TGTGTCTTCGACATGGG--GGCTGAGGTTGGCTTCAACATGTACCTGATAGATATAGGTG 1033464 Query 20799 GCGGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCA 20855 | |||||| || | ||| |||| || ||| | |||||||| || | || | Sbjct 1033465 GTGGCTTT-CCTGTATC--TGAGGATGCAAAGCTTAAATTTGAGGAGATCACCAGTGTAA 1033521 Query 20856 TTAACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAAC 20915 | ||| | ||| |||| | | |||||||| || | ||||| | || ||| | Sbjct 1033522 TCAACCCAGCCCTGGACAAGTATTTTCCATGAGACTCGGGAGTGACACTCATAACTGAGC 1033581 Query 20916 CTGGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA 20973 | ||||| ||||| | | | || || | || | || || | | | ||||| ||||| Sbjct 1033582 CGGGCAGATACTATGTTGCGTCAGCTTTCACGCTTGCAGTTAATATCATTGCCAAAAA 1033639 >seq98 Length=4963462 Score = 109 bits (120), Expect = 5e-19 Identities = 213/309 (69%), Gaps = 12/309 (4%) Strand=Plus/Plus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| | || || ||||| ||| ||| |||| | |||||||| || | Sbjct 4126406 ATGCCTTCTATGTTGTGGACCTGGGAGACATTCAAAAGAAACATCTGAGATGGCTAAAAG 4126465 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323 || | ||| |||||| || || | || || || | || ||| ||||| | | Sbjct 4126466 CTCTTCCTCAAGTCACCCCGTTAT--GCAGTCAAATGC---AATGACAAGAGAACCATAG 4126520 Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381 ||||| ||||||||| | || || |||||||||||||| ||| ||||| |||| Sbjct 4126521 TGAAGACTCTAGCTGCCATCTGGACGGGATTTGACTGTGCCAGAAAGACTGAGATACAGT 4126580 Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441 | |||| | ||| || || |||||||||| | | ||| || |||||||| || Sbjct 4126581 TGGTGCAGAGTCTTGGGGTGTCTTCAGACAGGATCATCTATGCAAACCCTTGTAAACAAG 4126640 Query 20442 CTTCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499 || || || | || ||||| || ||| ||||| | |||||||||| ||||| || Sbjct 4126641 TGTCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGA 4126698 Query 20500 AGAAGAGCT 20508 || ||||| Sbjct 4126699 AGTCGAGCT 4126707 Score = 100 bits (110), Expect = 3e-16 Identities = 211/309 (68%), Gaps = 12/309 (4%) Strand=Plus/Plus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| | || || ||||| ||| ||| |||| | |||||||| || | Sbjct 994549 ATGCCTTCTATGTTGTGGACCTGGGAGACATTCAAAAGAAACATCTGAGATGGCTAAAAG 994608 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323 || | ||| | |||| ||||| | || | || | || ||| ||||| | | Sbjct 994609 CTCTTCCTCAGGTCACCCCATTAT--GCAGACAAATGC---AATGACAAGAGAACCATAG 994663 Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381 ||||| ||||||||| | | || |||||||||||||| ||| ||||| |||| Sbjct 994664 TGAAGACTCTAGCTGCCATCTGGATGGGATTTGACTGTGCCAGAAAGACTGAGATACAGT 994723 Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441 | |||| | ||| || || |||||||||| | | ||| || |||||||| || Sbjct 994724 TGGTGCAGAGTCTTGGGGTGTCTTCAGACAGGATCATCTATGCAAACCCTTGTAAACAAG 994783 Query 20442 CTTCGCATATAACGTATGCCGCTCA--AACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499 || || || | || ||||| || ||| ||||| | |||||||||| ||||| || Sbjct 994784 TGTCTCAGATTAAATACGCCGC-CAGTAAC-GGAGTCCAGATGATGACTTTCGATAGCGA 994841 Query 20500 AGAAGAGCT 20508 || ||||| Sbjct 994842 AGTCGAGCT 994850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463506262361520