Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 1e-14 >seq18 Length=22869779 Score = 95.1 bits (104), Expect = 1e-14 Identities = 196/286 (69%), Gaps = 23/286 (8%) Strand=Plus/Minus Query 1479 TACCTGAGGGGGATACTATAGCAGGAGAGAGCGAGGCCGCCGCTTTGGCAACAGCTGCTA 1538 |||||| | |||| | || | ||| ||||| ||| |||| |||||||||||| Sbjct 15006437 TACCTGTGAGGGAGGCCATGGTGAGAGGGAGCGGAGCCT--GCTTCAGCAACAGCTGCTT 15006380 Query 1539 GAGTGAGATGTGCTCGCTATACTTTTAGGGAACTG-TATATAAAGGGCTAGTTGTAAGGA 1597 ||| ||||||| |||| || | ||| || |||||||||||| | || |||| Sbjct 15006379 GAGCCAGATGTGTTCGCCATGGCCTCCGGG---TGATATATAAAGGGCCCGCCGTGAGGA 15006323 Query 1598 -GGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACTCAG-----------AAAACA- 1644 ||| || | | || ||||||| || || | ||| ||||| |||||| Sbjct 15006322 AGGACCA-TCAGTGTTCCGCCCATGGCAAGATTATTGCTCAGCTTTTCTCCAGAAAACAC 15006264 Query 1645 TTTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAATG---AAGTT 1701 ||||||| || |||| | | || | |||||| |||| |||||||||| | ||| Sbjct 15006263 TTTCAAAATTTTGCCGCCCAAGGCTGAGTGAAAGCAGGGCTGGAAGGAAATGCTGAGGTT 15006204 Query 1702 ACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG 1747 ||||| ||| ||||||||||| ||| || |||| |||||| || Sbjct 15006203 ACCCTCAAGGTGGGCAGATGCCTGAGTCAGTGCAGGCACACACAGG 15006158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438522782702000