Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq65 123 2e-23 seq186 122 8e-23 seq4 122 8e-23 seq228 113 4e-20 seq68 93.3 4e-14 seq126 84.2 2e-11 seq109 84.2 2e-11 >seq65 Length=8612916 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| |||||||| || | |||| | | | ||||| || Sbjct 6272646 AAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCA-TCCTCCAG 6272588 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || |||| || ||||||||||| || |||||||| ||| ||| ||| Sbjct 6272587 CTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGGAT 6272528 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || |||| |||| ||||| |||| || || |||| ||||| ||| ||||| Sbjct 6272527 TTTAGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTGCC 6272468 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 6272467 AGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq186 Length=2028101 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | || | | | || || |||||||||| Sbjct 786251 GGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCA-TCTTCCAGCTGCTTGC 786193 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| ||||||||||||||||| || |||||| | Sbjct 786192 CAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTT 786133 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || ||||||||| || | ||||| ||| ||||| ||||| | Sbjct 786132 TCACATTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGTCAGGG 786073 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 786072 TCTTCACGAAGATTTGCAT 786054 >seq4 Length=40935223 Score = 122 bits (134), Expect = 8e-23 Identities = 147/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| || | ||| || | |||| | || || ||||||||||| Sbjct 7265328 GGTGGACTCTTTCTGGATGTCGTAGTCAG--AGTGTGGCCA--TCTTCCAGCTGCTTGCC 7265383 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||||||||||||||||||||| || |||||| ||| Sbjct 7265384 TGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCTTGGATCTTGGCCTT 7265443 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| || || || |||| | || | |||| ||| ||||||||||| || Sbjct 7265444 CACATTCTCAATGGTATCACTGTGCTCAGCCTCCAGAGTGATGGTCTTGCCGGTCAGGGT 7265503 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 7265504 CTTCACGAAGATTTGCAT 7265521 >seq228 Length=1351672 Score = 113 bits (124), Expect = 4e-20 Identities = 153/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| |||||||| || ||||| || | ||| ||| | ||||| || Sbjct 29177 AAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCA-TCCTCAAG 29235 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||| || |||| || ||||||||||| | ||||||| |||||||| ||| Sbjct 29236 CTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGGAT 29295 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | ||||| ||||| ||||||| || || | ||||| || |||| Sbjct 29296 -TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTGC 29354 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || || || |||||||| Sbjct 29355 CAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq68 Length=7962601 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| ||||||| | | ||| | | | ||||| ||||| ||||| Sbjct 2654581 GTGGACTCTTTCTGAATATTGTGGCCTGAGAGAGTGCGGCCA-TCCTCTAGCTGTTTGCC 2654523 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || |||| || | | |||||| || |||||||| |||||||| ||| ||| || | Sbjct 2654522 CGAAAAAATCAGATGGTACTGGTCAGGCGGGATGCCCTCCTTGTCTTAGAT-TTTAGCAT 2654464 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| || || | |||| || || | ||||| ||| ||||| ||||| | Sbjct 2654463 TGACATTCTCAATGGTATCACTAAGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGG 2654404 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 2654403 TCTTCACAAAGATATGCAT 2654385 >seq126 Length=3816233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| || ||||| ||| || | | | || || || || || || Sbjct 216233 GTGGACTCTTTCTGAATGTTGTAGTCGGACAGGGAGCCCA--TCTTCCAGTTGTTTACCG 216176 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| || |||||| || ||||||||||| ||||| ||||| |||| Sbjct 216175 GCAAAGATCAGCCTCTTCTGGTCAGGGGGGATGCCTTCTTTGTCTTGAATCTTGACCTTG 216116 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| ||||||| || | || ||||| ||| || | |||| ||| Sbjct 216115 ACATTCTTGATGGTGTCACTGGGCTCAACCTTGAGGGTGATGGTCTTACTAGTCAAAGTC 216056 Query 133644 TTTACGAAAATCT 133656 || || || |||| Sbjct 216055 TTCACAAAGATCT 216043 >seq109 Length=4293992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||| ||||||| | | ||| | ||||| | | Sbjct 3359979 AATTGCAGGGTGGACTCTTTC----TATTGTAGT--TTGAGAGTGCAGTCATCCTCCAAC 3359926 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || |||||| | ||| || | || |||||| || |||||||| |||||||| ||| Sbjct 3359925 TGTTTGCCCACAAGAATCAGACACTACTGGTCAGGCGGGATGCCCTCCTTGTCTTGGAT- 3359867 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | ||| ||||| ||| ||| || |||| ||||| ||| ||||| Sbjct 3359866 TTTAGCTTTGACATTCTCCGTGGTGTCACTGGTCTCAACCTCGAGGGTGATGGTCTTGCC 3359807 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || ||||||| Sbjct 3359806 AGTCAGGGTCTTCACAAAGTTCTGCAT 3359780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483379775702360