Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq228 98.7 7e-16 seq65 98.7 7e-16 seq126 87.8 1e-12 >seq228 Length=1351672 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || || ||| ||||| || |||||||| || ||||| ||||| | || || Sbjct 29173 CACCAAGTGCAGGGTGGATTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTC 29232 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||||| | ||||||||||| ||||||||| || | | | || || ||||| Sbjct 29233 AAGCTGTTTGCTGGCAAAAATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTG 29292 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||||| | || |||| || | |||||| || | || || |||| ||||| || | Sbjct 29293 GATTTT-AGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCT 29351 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || |||||||||||||| Sbjct 29352 TGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29382 >seq65 Length=8612916 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || || ||| |||||| || || ||||| || ||||| ||||| | || || Sbjct 6272650 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGCGTGCGGCCATCCTC 6272591 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || ||||| ||||||||||||| |||||||| || |||| | || || ||| Sbjct 6272590 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 6272531 Query 33660 AATTTTCTGTTTCAACATAGTCA-CGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||||| |||| ||| ||| |||||| || | ||| || || | ||||| || | Sbjct 6272530 GATTTT-AGTTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCT 6272472 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 6272471 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 6272441 >seq126 Length=3816233 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| ||||| || || | |||| || |||||| |||||| || |||||||| |||| Sbjct 216265 CACCTCCTCTTAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCGG 216206 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || | || | || |||| |||||| |||||||| |||| | || ||| || | | Sbjct 216205 ACAGGGAGCC--CATCTTCCAGTTGTTTACCGGCAAAGATCAGCCTCTTCTGGTCAGGGG 216148 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCA 33700 | | ||||||||||| ||| || || | | | | |||||| || | || | Sbjct 216147 GGATGCCTTCTTTGTCTTGAATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTCAA 216088 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 | | | ||||| || |||| || || || || |||||||||| Sbjct 216087 CCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCACAAAGATCT 216043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328676802722880