Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq19 118 3e-21 seq13 102 2e-16 seq7 95.1 3e-14 seq12 93.3 1e-13 seq14 91.5 3e-13 seq127 87.8 4e-12 seq54 87.8 4e-12 >seq19 Length=23049436 Score = 118 bits (130), Expect = 3e-21 Identities = 159/221 (72%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || | ||||| ||||| || || || |||||| | || || ||| || || Sbjct 10825312 CAGATTTTCTTGAAAACTCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGAT 10825253 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| || || || ||||||||| || || ||| Sbjct 10825252 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 10825193 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || | ||||| ||||||||||| |||||| | || |||| | | Sbjct 10825192 AGACTAATCTTTGCTGTCAAGCAACTGGAAGATGGACACACTTTGTCTGACTACAGCATT 10825133 Query 206353 CAGAAAGAGTCTAC---TCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| || |||||| ||||| ||||||||||| Sbjct 10825132 CAAAAGGAGTCCACTCTTCTTCATCTTGTGTTGAGACTTCG 10825092 >seq13 Length=31322082 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || | |||||||| || || |||||||| ||||| Sbjct 23495885 GTAAAGGCCAAGATCCAGGATAAGGGAGGAATTTCTCCCGATCAGCAAAGACTGATCTTG 23495944 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||| || | ||||| | || |||||| |||| || ||||| Sbjct 23495945 GCTGGCAAGCAACTGAAAGACAGATGTGCTTTGTCTGACTACAACATCCAAAAGGAGTCC 23496004 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||| || ||||||||||| Sbjct 23496005 ACTCTTCACCTGGTATTGAGACTTCG 23496030 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| || ||||||||||| ||||| || |||| || ||||||| ||||| Sbjct 23496030 CGAAGTCTCAATACCAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGCA 23495971 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | || |||| ||| ||||| || || ||||| || | ||| ||| Sbjct 23495970 CATCTGTCTTTCAGTTGCTTGCCAGCCAAGATCAGTCTTTGCTGA 23495926 >seq7 Length=35612534 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| | || |||||||||| | || || |||||||| ||||| | || ||| Sbjct 30012231 AAGATCTAGGATAAAGAAGGAACTCCTCCTGATCAGCAAAGACTGATCTTTACTGGCAAG 30012172 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||| || || |||||| | || |||||| | || || ||||| |||||||| Sbjct 30012171 CAATTGGAAAATAGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCAT 30012112 Query 206374 CTTGTTTTGAGACTTCG 206390 ||||| ||||||||||| Sbjct 30012111 CTTGTGTTGAGACTTCG 30012095 >seq12 Length=31948864 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || |||| | | || || ||| || || | ||| Sbjct 15540904 AAAACCCTCACGGGGAAGAC---CACTCTCAAGGTTGATCCTTCGGATACGATAGAAAAT 15540848 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || || ||||||| ||||| Sbjct 15540847 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACGGATCTTT 15540788 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA---GAAAGAG 206361 || || ||||| |||||||||||| | ||| | | || |||||| | || | ||| Sbjct 15540787 GCTGGGAAGCAATTGGAAGATGGATGTGCTTGGCCTGACTACAACATTCAAACGGCGGAG 15540728 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTC 206389 || |||||||| ||||| |||||||||| Sbjct 15540727 TCCACTCTTCATCTTGTGTTGAGACTTC 15540700 >seq14 Length=29593583 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 206200 AAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATT 206259 || || |||||| |||| || ||| || || || | ||| |||||| ||||| Sbjct 4554942 AAGACCATCACTCTGGAGGTTGAACCCTCGGATACGATAGAAAATGTAAAGGCCAAGATC 4554883 Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319 || || || ||||||||| |||||| |||||||| ||||| || || ||||| || Sbjct 4554882 CAGGATAAGGAAGGAATTCCTCCGGACCAGCAAAGACTGATCTTTGCTGGCAAGCACCTG 4554823 Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||||||||| | |||||| | || |||||| Sbjct 4554822 GAAGATGGACGTACTTTGTCTGACTACAAC 4554793 >seq127 Length=3912380 Score = 87.8 bits (96), Expect = 4e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| || || || |||||| | | || | | | || Sbjct 1384217 CAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCAAGGTTGGACCCTTGGAT 1384158 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || |||||| ||||| | || || ||||||||| || || ||| Sbjct 1384157 ACAATAAAAAATGTAAAGGCCAAGATCCGGGATAAGGAAGGAATTCCTCCTGATCAGCAA 1384098 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| | | ||||| ||||||| || ||| || | || |||||| | Sbjct 1384097 AGACTGATCTTT-CTGTCAAGCAACTGGAAGACAGACATACTCTGTCTGACTACAACATT 1384039 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| |||||||| ||||| ||||||||||| Sbjct 1384038 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 1384001 >seq54 Length=10138281 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 ||||||||| ||||| ||| |||| | || ||| || | || ||||||| |||||| | Sbjct 8825303 AAGTCTCAACACAAGATGAGGAGTGGTCTTTTTTTGAATGTTGTAGTCAGACAAAGTACA 8825244 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||| ||||| || || ||||| |||| ||| ||| Sbjct 8825243 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGA 8825201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181718000425669