Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq57 86.0 6e-12 seq186 84.2 2e-11 >seq57 Length=10025392 Score = 86.0 bits (94), Expect = 6e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 147511 ACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTC 147570 || ||||| | |||||||||||||||||| || ||||| || || |||||||| ||| Sbjct 79461 ACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGTTGATTGCTCTTC 79520 Query 147571 CGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||||| || | |||||| |||||||||| || Sbjct 79521 CGATTACAGGAATCTTTGTAGAGCATGTATGG 79552 >seq186 Length=2028101 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| | ||||| |||||| ||||| || || | | Sbjct 786247 GACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCAGCA 786188 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || ||||| |||||||| ||||| || || ||||| Sbjct 786187 AAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTCACA 786128 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | ||||||| || | || | || || |||||||| || || Sbjct 786127 TTCTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 786068 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 786067 ACGAAGATTTGCAT 786054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476570753582040