Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq351 98.7 3e-17 seq140 98.7 3e-17 seq51 98.7 3e-17 seq30 95.1 4e-16 seq129 84.2 7e-13 >seq351 Length=425020 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 244735 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 244676 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 244675 CCGGGTTTCGGC 244664 >seq140 Length=3299651 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3094078 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3094019 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3094018 CCGGGTTTCGGC 3094007 >seq51 Length=10926511 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 600991 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 600932 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 600931 CCGGGTTTCGGC 600920 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 602635 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 602576 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 602575 CCGGGTTTCGGC 602564 >seq30 Length=17577995 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 4019800 GCCGAAATAGCTCAGTTGGGAGAGCGGCAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 4019859 Query 2829 CCGGGCTTCAGC 2840 || || |||||| Sbjct 4019860 CCAGGTTTCAGC 4019871 >seq129 Length=3745367 Score = 84.2 bits (92), Expect = 7e-13 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||| ||||||||||||||||||||||| ||||||| | || | Sbjct 3200178 GAAATAGCTCAGTTGGGAGAACATTAGACTGAAGATCTAAAGGTTCCTGGTTTGATCCTG 3200119 Query 2832 GGCTTCAGC 2840 | |||||| Sbjct 3200118 GATTTCAGC 3200110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848423092905