Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq39 279 6e-70 seq5 161 1e-34 seq100 145 9e-30 seq4 138 1e-27 >seq39 Length=13454942 Score = 279 bits (308), Expect = 6e-70 Identities = 253/319 (79%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||| ||||| || | || ||||||||| || || || | | ||||| |||| Sbjct 4103701 GTGGTGACCCAAGATGAAAGAGAGCCGCTGAACACACCTGCGTCTTTAAGATGCTTCCTG 4103760 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 ||| | | ||||| || |||||||| || ||||||||||||||| | | | ||||| Sbjct 4103761 GAGATTCCCCAGGAAGTCCTGATTGTGACATGGCAGAAAATCAAGGCTTCAAGCCCAGAC 4103820 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | ||||| ||||| || || ||||| |||||||||| ||| |||||||| ||| Sbjct 4103821 AACATGGTCACTTTCAGCAAGGAACATGGGGTCGTGGTCCAGCAGGCCTATAAGGATAAG 4103880 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 || ||||| ||| |||| ||||| || ||| ||||||| || || ||||||||||| | Sbjct 4103881 ATGAACATAACCGAGCTGGGACTTCAGAACACAACCATAACCTTCTGGAATACCACTCTG 4103940 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || ||||||||||| ||||| || ||||| || ||||| || || ||||| || || || Sbjct 4103941 GACGACGAGGGGTGTTACAAGTGTCTCTTCAATACCTTCGGTTCCGGGAAGATTTCAGGA 4104000 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | |||||||||||||||| Sbjct 4104001 ATAGCCTGCCTCACCCTCT 4104019 Score = 188 bits (208), Expect = 8e-43 Identities = 208/277 (75%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 ||||||||||| || || | || |||||||| | || |||||||| || |||| || Sbjct 4106128 GTGCAGCCCACAGTATTCGTTCACTATAAATTATCCGAAGACCACCTAAATGTCACTTGC 4106187 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||||||||||||| | ||| || | |||||| | | ||||||| ||| || Sbjct 4106188 TCTGCCAATGCCCGCCCAGCCCCTGCAATCTCCTGGAAGGTCGCTGGGTCAGGAATGGAC 4106247 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 ||||||| ||| || | | || | ||||| || || ||||| | |||||| ||||| Sbjct 4106248 AACAGTACTGAGATTATCACACACCCCAATGGGACCACGTCTGTCATCAGTGTCCTCCAC 4106307 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 | ||||||||||||| |||| |||| |||||||| |||||||| ||| |||| |||| Sbjct 4106308 ATCAAAGACCCCAAGAATCAGATGGGGAAGGAGGTGATCTGCCAGGTGCTGCACTTGGGG 4106367 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 ||| | || |||| || ||||||| | ||| |||| Sbjct 4106368 AATATGACCTACTTCGGGCAAACTGTGAACAAAGGTA 4106404 >seq5 Length=37766398 Score = 161 bits (178), Expect = 1e-34 Identities = 136/167 (81%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| |||||||| | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 25977062 CTTCAGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 25977121 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || || |||||||| | |||| ||||||||||||||| || ||||| |||| Sbjct 25977122 GGGCACACCTAGCCCCATGTCTGCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 25977181 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGG 147148 ||||||| |||||||| ||| ||||| || ||||| ||||||| Sbjct 25977182 CACCACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCATGG 25977228 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| ||||||||||| ||||| || || || || | ||| || |||||| Sbjct 25979495 GCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAGTCTCCTTCTTTTCTGCTG 25979554 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 ||||| ||| | | || || || ||||||||| |||||||||||| ||||||| Sbjct 25979555 GAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCGTTGGCGTCCCAGATTTTCACTCCC 25979614 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGG 147438 || | || || || |||| | |||||| ||| || Sbjct 25979615 TTAGACGACAGTTCTTTAGCATTCGTGGATCCCTGG 25979650 >seq100 Length=4670911 Score = 145 bits (160), Expect = 9e-30 Identities = 131/167 (78%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||| ||||||| Sbjct 546207 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAAGAGGTGA 546266 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| |||||||||| || ||||||||||| ||||||| || |||| Sbjct 546267 TGCCCCAGGCCGAGAGCCA------------GGGCCCGGACATCAAGGAGCCCGTGAACT 546314 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| ||||| || || || ||||||||| ||| Sbjct 546315 CGCTGGGGGAGAAGCTGAAGACGCTGAGGCTGCAGCTGCGGCGCTGT 546361 >seq4 Length=40935223 Score = 138 bits (152), Expect = 1e-27 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| ||||| ||| | |||| || ||||||| ||||||| |||| |||||||| Sbjct 30849798 GTACTCCCTGGTATTTGTCATTGGCCTGGTTGGCAACATCCTGGTGGTCCTGGTCCTCAT 30849857 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 | || |||||||||| || |||||||| ||||| ||| ||||||||||| | ||| Sbjct 30849858 GCAATATAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAACCTGGCCGTGTCTGA 30849917 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACTGGTG 8788 |||||| | | ||||| || ||||| |||||| ||| | | || || |||||| | Sbjct 30849918 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACTACAATCTGAAGGATAACTGGAG 30849977 Query 8789 GGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGT 8848 | | | | | || ||||||||| | ||| |||| | || | | |||| Sbjct 30849978 GTT-------CAGCGAAGGCACGTGTAAGTTGCTGTCGGGGCTTTACTACATAGGCCTGT 30850030 Query 8849 ACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 |||| || || | || || |||||| |||| | |||||||| || || |||| Sbjct 30850031 ACAGTGAGATCTTTTTCATGATCCTGCTGACCATCGACAGGTACCTGGCCATTGT 30850085 Score = 111 bits (122), Expect = 2e-19 Identities = 526/829 (63%), Gaps = 34/829 (4%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||| | |||||||| | | ||||| | ||||| | ||||| | | |||||| | Sbjct 30827310 TACGCCCTGGTGTTCGGGGTGGGGCTGCTGGGCAACGTGATGGTGGTGGTGATCCTCACA 30827251 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || |||| | | ||| | || |||||||||||| |||| ||||||||||| | ||||| Sbjct 30827250 AAATACAGGCGCCTCTGCATTCTGACCAACATCTACCTGCTCAACCTGGCCATCTGTGAC 30827191 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGGG 8790 |||| | | ||||| || ||||| ||||| |||| || | | |||| || | Sbjct 30827190 TTGCTCTTCCTCTTCACGCTGCCCTTCTGGATCCACTACC--TGAAGTGGAA----TGAG 30827137 Query 8791 TGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTAC 8850 |||| | ||| ||||| ||||| | ||| |||| | | | | ||||| Sbjct 30827136 TGGGTTTTTGGCCATGGGATGTGCAAGTTGCTCTCGGGGCTTTACTGCATCGGCTTGTAC 30827077 Query 8851 AGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGCG 8910 | || || | || ||||||||| |||| | ||| |||| || || | || |||| Sbjct 30827076 GGGGAGATCTTTTTCATCATCCTGCTGACCTTAGACCGGTACCTGGCCATCGTCCACGCC 30827017 Query 8911 GTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCTGG 8970 ||| | | || ||| || | || |||||| | ||| ||||| | ||| Sbjct 30827016 GTGTTTGCCCTGCGAACCCGGACCGTCACTATTGGCATCGTAAGCAGTGTCCTGACGTGG 30826957 Query 8971 ATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCCACA 9030 ||||| | | ||| || | || || |||||||| | | || | | | Sbjct 30826956 GCCCTGGCGGGGCTGGTGGCCCTCCCCGAATTTATCTTCCACAAGGCCCAGGAGCAGTCC 30826897 Query 9031 GGCAAGGGGGTCTGCCAAGCCTCCTACACAGA------------CTTTTGGAAGGGGGTT 9078 || | | | |||| || ||| | || | |||||| || || Sbjct 30826896 GGAATGCTGTTCTGTAGTTCCCTGTACCCCGAGGACGAGGAGGACGCCTGGAAGCGGTTT 30826837 Query 9079 GATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCTTCTGC 9138 ||| | || |||| | | | | ||| ||||| |||| | |||| ||||| Sbjct 30826836 TATGCTCTGAGAATGAACCTCCTGAGCCTGGCTCTGCCCCTGCTCGTTATGGTTGTCTGC 30826777 Query 9139 TACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTGCACGC 9197 |||| |||||||||| || | | | |||| || |||| | ||| | | || Sbjct 30826776 TACTCCGGAATCATCAAGACGCTGATGAGATGCCC-CAGCAGG---AAAAAGCACAAGGC 30826721 Query 9198 CGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTACAACGT 9257 | || ||||||||| |||| ||||| | | ||| | || ||| ||||| ||| | Sbjct 30826720 CATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGGCGCCCTATAACCT 30826661 Query 9258 CCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTGGGC-CAGACTGTGAAGCGCGGC 9316 || || || | | | |||||| || |||| ||| ||||| ||||| Sbjct 30826660 GGTGGTCCTTCTCTCTGCTTTTCAAGAG---ATCTTTGACATCAG-CTGTG---CGCGGA 30826608 Query 9317 GCAG---GGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCG 9373 ||| | ||||||||||| | |||| | ||| ||||| ||| ||| |||||||| | Sbjct 30826607 GCAACCAGCTGGACATGGCCTTGCAGGTGACGGAGGTGATCTCCTACACGCACTGCTGTG 30826548 Query 9374 TCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCCAACAGAACCT 9422 ||||||||||||||||||| || || || || | ||||| ||| |||| Sbjct 30826547 TCAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGTTCCGGCAGCACCT 30826499 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382 ||||| ||||| || |||| | ||| ||||||||| ||| |||||||||||||||||| Sbjct 30850514 TGGACCTGGCCATCCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCA 30850573 Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 ||||||| | ||||||||||| | ||||| Sbjct 30850574 TCATCTATGTCTTTGTGGGCGAGAGGTTCC 30850603 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || ||| | | ||||| ||||| |||| |||| || Sbjct 30762148 TACTCGCTGGTGTTCATCTTCGGGTTTGTGGGCAACCTGCTGGTCGTCCTCATCCTGATC 30762089 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||| ||| | ||| | || |||||| |||||| |||| ||||||||||| | ||| Sbjct 30762088 AAGTGCAAAAAGCTGAAGAGCATGACGGACATCTACCTGCTCAACCTGGCCATCTCCGAC 30762029 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 ||||| | | ||||| ||||||| ||| ||||| Sbjct 30762028 CTGCTCTTCCTGCTCACCATCCCCTTCTGGGCTCACT 30761992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583438483749600