Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq175 95.1 1e-14 seq186 87.8 2e-12 seq228 84.2 2e-11 seq127 84.2 2e-11 seq19 84.2 2e-11 seq126 82.4 7e-11 >seq175 Length=2568445 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||| | ||| | | |||||||||||||||||| || | ||| || | | | Sbjct 778869 CTCAACACAAGATGAAGCAGGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACACCCA 778810 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || ||||| ||||| || ||||| |||| ||||| || | ||||| | ||||| Sbjct 778809 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTA 778750 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| ||| | | || | | ||| || | ||| |||| | ||||| Sbjct 778749 TCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTTGAGAGTGATG 778690 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| | ||||||||||| ||||| || Sbjct 778689 GTCTTCCCCGTGAGGGTTTTCACAAAAATCTGTAT 778655 >seq186 Length=2028101 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 786245 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCAGCAAA 786186 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || ||||| ||| |||||| |||| | | Sbjct 786185 GATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTCACATT 786126 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || | |||| ||||| ||||| || || || |||| || ||||| Sbjct 786125 CTCAATGGTATCACTGGGCTCCATCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 786066 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 786065 GAAGATTTGCATTTTG 786050 >seq228 Length=1351672 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||| || | | || || | || || ||||| || | ||||| Sbjct 29192 TCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGACCATCCTCAAGCTGTTTGCTGGCAAAA 29251 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 |||| ||||||||||| || | | || ||||||||| ||| ||| || || | | | Sbjct 29252 ATCAGACGCTGCTGGTCAGACAGGATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATT 29310 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || || || |||| || ||||| Sbjct 29311 CTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTCTTCAC 29370 Query 35725 AAATATCTGCATT 35737 ||| ||||||||| Sbjct 29371 AAAGATCTGCATT 29383 >seq127 Length=3912380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 ||| | |||||||| | |||||||| | ||| | || |||||||||||||||||| Sbjct 1383989 TTAGTACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAG 1384048 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | || || | ||| ||||| ||||| | | ||| |||| | ||||| || Sbjct 1384049 TCAGACAGAGTATGTCTGTCTTCCAGTTGCTTGACAG-AAAGATCAGTCTTTGCTGATCA 1384107 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 | ||||| | ||||| ||| |||||| ||| | | || | || || | | Sbjct 1384108 GGAGGAATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTTTATTGTATCCAAGGGT 1384167 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||| | ||||| || || ||||| | ||||||||||| |||||||| Sbjct 1384168 CCAACCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 1384220 >seq19 Length=23049436 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/230 (68%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACT---CTCCTTTTGAATGTTGTAATCG 35566 |||||||| | |||||||| | ||| | | | ||||||||||||| |||| || Sbjct 10825086 CCACCACGAAGTCTCAACACAAGATGAAGAAGAGTGGACTCCTTTTGAATGCTGTAGTCA 10825145 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | ||| || | | || ||||| ||||| | ||||| || | | ||||| || | | Sbjct 10825146 GACAAAGTGTGTCCATCTTCCAGTTGCTTGACAGCAAAGATTAGTCTTTGCTGATCAGGA 10825205 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 |||| | ||||| ||| |||||| ||| | | || | | || || | ||| Sbjct 10825206 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 10825265 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || ||||| | |||||||| || |||||||| Sbjct 10825266 ACCTCGAGAGTGATGGTCTTCCCCGTGAGAGTTTTCAAGAAAATCTGCAT 10825315 >seq126 Length=3816233 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| |||| || || || | || ||||| || ||||| ||||| Sbjct 216228 CTCTTTCTGAATGTTGTAGTCGGACAGGG--AGCCCATCTTCCAGTTGTTTACCGGCAAA 216171 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || || |||||| | || | || || ||||| ||||| ||| | | | Sbjct 216170 GATCAGCCTCTTCTGGTCAGGGGGGATGCCTTCTTTGTCTTGAATCTTGACCTTGACATT 216111 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | ||||| || | || |||| | ||||| || |||| |||||||| ||||| Sbjct 216110 CTTGATGGTGTCACTGGGCTCAACCTTGAGGGTGATGGTCTTACTAGTCAAAGTCTTCAC 216051 Query 35725 AAA----TATCTGCATT 35737 ||| |||||||||| Sbjct 216050 AAAGATCTATCTGCATT 216034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450755344528120